-
Hello @nextgenusfs , how are you?
I'm trying to replicate your results from the AMPTk paper with the BioMocks sequences.
I've performed separated analysis from Illumina vs PGM data, I've used the …
-
id: GO:new1
name: CMG complex assembly
def: The aggregation, arrangement and bonding together of a set of components to form the CMG complex, a protein complex that contains the GINS complex, Cdc45p…
mah11 updated
4 years ago
-
@grst What a great tool, very much needed and appreciated! Thank you.
Towards making this better still and more enduring (including for VDJ biologists), I have a few comments/suggestions:
### A…
-
-
Hello,
Is it possible to process HIV sequences obtained from PacBio CCS mode where RT primer, UMI, and PCR primer are attached to the molecule template in DADA2? I know DADA2 can handle PacBio sequen…
-
@bdwilliamson
__Report:__
- [ ] add table/bullet list to executive summary, with: # sequences pulled from CATNAP, # sequences with complete data used in analysis, class balance (if binary), other…
-
Over the past weekend, I did some soul searching on where I stand between F# and Hack, which lead me into a deep-dive that anyone interested can read here: https://arendjr.nl/2021/09/js-pipe-proposal-…
-
Hi again @esolares,
After preparing both blat and Busco inputs, I runned Hapsolo for my genome. Here is the command I used:
`
/home/svillanu/Programs/HapSolo/hapsolo.py -i $genome -p inputs/all…
-
Hi,
I want to validate my bioinformatics protocol in analyzing 16S rRNA V3-V4 sequence. I was using the following mock sequences, [https://github.com/andreiprodan/mock-sequences] from [https://doi.or…
-
Hi,
My data is ITS+LSU regions from oxford nanopore sequencer and contain 96 samples.
I blast and generate the feature table (TAX) and frequency table (OTU) by each sample.
What should l do i…