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Hi team,
I ran WGBS workflow with publically available WGBS dataset and met an error.
I checked the issuses but couldn't find same error I met.
Below, I attached the logs.
Thank you for your h…
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```
getfastq output not found in: /lustre7/home/lustre4/kfuku/my_project/evolutionary_transcriptomics/20230527_gfe_pipeline/gfe_data/getfastq/SRR18843778, layout = single
Skipping. If you wish to ob…
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# Bactopia v3
I am making progress towards a version 3 release of Bactopia (🥳). This version of Bactopia is going to introduce some fun an exciting things, but at the same time its going to break …
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### Description of the bug
Over the past few days I have encountered an issue when running `nextflow run nf-core/fetchngs`that is related to the accepted values for `--ena_metadata_fields`. No change…
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### Description of the bug
Hi,
I experienced weird problem when trying to download the dataset.
Pipeline was going OK, but gets kicked out at some point with error
```
A DataflowVariable …
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### Data Owner Name
FileDrive Labs
### Data Owner Country/Region
China
### Data Owner Industry
Life Science / Healthcare
### Website
https://filedrive.io/
### Social Media
`…
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### Data Owner Name
FileDrive Labs
### Data Owner Country/Region
China
### Data Owner Industry
Life Science / Healthcare
### Website
https://filedrive.io/
### Social Media
`…
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Request to globally add the NCBI issued by agent to all records with a GenBank identifier.
Currently the only two NCBI identifiers in Arctos are GenBank and BioSample identifiers. Both of these shoul…
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```
Traceback (most recent call last):
File "/home/kfuku/miniconda3/bin/amalgkit", line 372, in
args.handler(args)
File "/home/kfuku/miniconda3/bin/amalgkit", line 43, in command_quant
…
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### Description of feature
I was trying to download some data, and apparently one of the files was 'too big' for the sra tools prefetch thingy.
Seems like the solution is given in the message. I w…