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@pbuttigieg
@cmungall
@TBKreddy
The following ENVO term labels were found suitable to be assigned under ENVO feature (envo_local_scale):
planetary subsurface zone
oasis
mine
marine tidal …
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[Soil-NMDC-Template_Compiled](https://docs.google.com/spreadsheets/d/1pSmxX6XGOxmoA7S7rKyj5OaEl3PmAl4jAOlROuNHrU0/edit#gid=0) is the input into this repo's pipeline for building DataHarmonizer [data.t…
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Study: gold:Gs0103573 / nmdc:sty-11-1t150432
Title: Populus root microbiome
Omics Type(s): metagenomes
Steps:
- [x] `update-study` with updated_identifiers.tsv
- [x] `ingest-records` nmdc:sty-11-1t15…
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```
What steps will reproduce the problem?
1. Join hub
2. Start dowbnloading big file with many sources 4 GB /80 Sources
3. Search for alternatives, add all sources to download item
4. call start tran…
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Updating Studies, BioSamples and OmicsProcessing:
- [ ] Update Stegen gold:Gs0114663 nmdc:sty-11-aygzgv51
- [ ] Update SPRUCE gold:Gs0110138 nmdc:sty-11-33fbta56
- [ ] Update EMP gold:Gs0154244…
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Please review and delete if possible old branches. There is some work in the develop branch to add singleM that was never merged into master.
aclum updated
1 month ago
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In the future we might want to abstain from begining names with a number. E.g.: The structured comment names: 16s_recover, 16s_recover_software
Many programing languages do not permit variables or…
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Relates to https://github.com/microbiomedata/nmdc-runtime/issues/529
Feature request: Expand minting endpoint to take a `OmicsProcessing` ID along with `WorkflowExecutionActivity` type (or Berkeley…
aclum updated
3 months ago
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Submitter: Montana Smith, 0000-0002-8683-0050
Submission ID: 7707eb6f-6a00-44d6-b58c-3998eec6a179
Has data been generated: No
PI name:
PI orcid:
Status: Submitted -Pending Review
Data ty…
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Submitter: Montana Smith, 0000-0002-8683-0050
Submission ID: 5aa44ab4-0dcc-4d34-99b1-7e3c22c5528e
Has data been generated: Yes
PI name:
PI orcid:
Status: Submitted -Pending Review
Data t…