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see https://github.com/Open-Systems-Pharmacology/Forum/issues/232
From @SCarter79
>Theres an error on your "Transport Proteins", you have 3 different subtypes all labelled as SLCO1B1. The gene ID…
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This is of particular interest when modeling PK of proteins and a full blown, free floating target as binding partner is required for proper description of PK, e.g. an antibody binding to a protein, b…
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Hi there, thanks again for writing this useful tool!
I can run the CGC Finder without a problem with just fna files as input. However, when I tried providing my own protein sequences and the associ…
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- [x] Import ppi-query as a maven module inside PMB
- [x] Test invoking ppi-query function from PMB
- [ ] Define interface between ppi-query and PMB
- Data interface for proteins, interactions, e…
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See also:
* [https://github.com/nih-cfde/update-content-registry/](https://github.com/nih-cfde/update-content-registry/)
* [https://github.com/nih-cfde/knowledge-base-deposit](https://github.com/…
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Hi Vadim
Thanks for your work in DiaNN 1.9.
When analyzing the results from version 1.9, I've observed discrepancies between the number of Protein.Group entries filtered by R and those reported i…
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## 🚀 Feature
I propose adding protein sequence data to MolNet as part of the recent efforts to increase support for proteins. Please feel free to suggest alternative datasets or use cases that shou…
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I have tried to create an updated version of the PDB70 database myself to include the proteins added since march, but because the uniclust30 database isn't updated either, I'd have to recreate that as…
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Hi Joel and community,
I ran EnrichM on my MAGs and it worked fine for nucleotide fasta files (.fa). I'd like to run protein through the pipeline so I annotated the MAGs using Prokka and I tried ru…
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```
What enhancement are you proposing?
- Project (Protein) Editor
- Allow users to add Proteins that aren't available on the psummary... or
edit a Protein's information.
What version of the produc…