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Traditionally when a gene is finally cloned the data on the Sequence based gene is transferred to the classically defined WBGene object, primarily for convenience as this involves moving the least a…
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Hello,
Trying to run `funannotate test -t all --cpus 8`, I get the following error:
```
########################################…
Homap updated
3 years ago
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In working on some models for defense responses in C. elegans, I'm not clear on how to model the action of the pathogen, e.g. a Gram-negative bacterium, in the pathway.
Should the pathogen be an in…
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I was wondering if there is any clear limitation to how many separate batches it is practical to train at once?
For example, I typically train scVI on datasets with ~30 batches from multiple papers…
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Uploading or importing via URL a gff3 files fails. The logs show the following error:
```
UnicodeDecodeError: 'utf-8' codec can't decode byte 0x8b in position 1: invalid start byte
```
Example fil…
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http://www.pantree.org/node/annotationNode.jsp?id=PTN001853063
PTN001853063 propagates the following annotations to SLX4/him-18 orthologs:
contributes_to 3'-flap endonuclease activity
contributes…
sjm41 updated
3 years ago
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Hello,
I would like to request a new GOCC term: Z granule
It should be
- part_of 'germ plasm' (GO:0060293)
- is_a 'cytoplasmic ribonucleoprotein granule' (GO:0036464)
I drafted a definiti…
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Make sure parasite papers are not included in the pipeline
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The is a "catchall" issue for progress on the OBO Dashboard. See a test version here:
http://obo-dashboard-test.ontodev.com/
Some have been discussed so far:
1. Open #1019 [discussed]
2. Commo…
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Hi,
I'm trying to test bpnet on C. elegans CHIP-seq data from encode. I made bw files from the encode bam files. I then made the following modifications to bpnet9 (because of C. elegans genome):
…