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The Gut Microbiome Is Associated with Clinical Response to Anti–PD-1/PD-L1 Immunotherapy in Gastrointestinal Cancer - Peng et al - Cancer Immunol Res.
https://aacrjournals.org/cancerimmunolres/artic…
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Divergent maturational patterns of the infant bacterial and fungal gut microbiome in the first year of life are associated with inter-kingdom community dynamics and infant nutrition – Emily M. Mercer …
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Hi,
I'm trying to run the attached file and despite several combinations of c1 and c2 values, only Nans are produced. Any thoughts on why this might be the case?
[output_table.csv](https://github…
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I have some issues with completing the pipeline.
The step GA_pre_scan does not produce any files in the final_resultss folder and then the pipeline stops in the GA_split step.
can you please help m…
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Hi, I'm microbiome researcher in South Korea.
Thank you for this amazing study.
While reading your paper, I'm wondering why did you remove phiX sequences.
(1) Why did you remove Escherichia p…
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**Is your feature request related to a problem? Please describe.**
We are working on some large datasets 20.000 > 100.000 + contigs and realised that one of the bottlenecks in our workflow is related…
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# dada2 pipeline for metabarcoding (CO1)
Thanks a lot for your dada2 pipeline, this is really cool. Our research group has been using it for our human microbiome projects. This is really cool.
We …
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https://docs.google.com/spreadsheets/d/17mEGpZC7jv5AngeQFqKiE7fUiZKjdBNpBnbEsAyEtEc/edit#gid=0
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Hi All,
Maybe a strange question, but is there any way of running in different language other than English. I am trying to use TRURL 13B PL (which is llama2 fine tuned on Polish), and my answers s…
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1. Add exercise on how to use getTaxonomyLabels(). The exercise could be with import exercises.
2.
In this exercise https://microbiome.github.io/OMA/docs/devel/pages/98_exercises.html#prelimina…