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Bumping into some really weird UShER (mis-)placement, starting with #305, and then #314 by @aviczhl2 , now there's another:
when I found some South African lineages with T478R, it is placed in that…
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There may be a problem with the AY.43 assignment, at least for samples from Russia.
According to https://www.pango.network/new-ay-lineages-and-an-update-to-ay-4-ay-12/, the defining mutation in that …
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Mutations on top of XBB.1.16.12: T5619C, C14117T
Inquiry: Spike_L368I,E180V,Q52H +T5619C
Sequence: EPI_ISL_17775025, EPI_ISL_17783018, EPI_ISL_17799024,
EPI_ISL_17799052, EPI_ISL_17799498, EPI_ISL_…
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*************edited November 20***************
**TRACKER**
BA.2.86: -C6541T,A7842, C8293T, G8393A (new query thx to @aviczhl2 )
JN.1 QUERY: C18894T, T15756A, A7842, -C6541T
XDD Query : C6541T…
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Transferred from https://github.com/sars-cov-2-variants/lineage-proposals/issues/374
Thanks to [olias120676](https://github.com/olias120676) double mutations [tracker tool ](https://ukcovid.xyz/spi…
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Migrated from https://github.com/cov-lineages/pango-designation/issues/1981
sub-lineage of: BN.1.3.5
mutations on top of BN.1.3.5: G4556A(orf1a:V1431I),G9753A(orf1a:R3163K),C17999T(orf1b:T1511I),G21…
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**Defining Mutations:** [_On top of XBB.1.5's T17124C > T10204C > T23018C_] > A23670G(S:N703S) > G1890A(ORF1a:R542H) > A2380G > A7754C(ORF1a:K2497Q), C21855T(S:S98F) > C1722T(ORF1a:A486V), A3740G(ORF1…
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Migrated from https://github.com/cov-lineages/pango-designation/issues/1899
I noticed that a branch of DY.1 shows quite high prevalence in Shanghai's recent sequences of 3.10-4.10(21/311). Interest…
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I mentioned this one briefly in the main pango github page : https://github.com/cov-lineages/pango-designation/issues/1949 ith @krosa1910, but it has grown further since so a pre proposal is deserved…
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![image](https://user-images.githubusercontent.com/125779492/233642460-338e2ac9-7381-426a-afea-90acf6389822.png)
BF.7.14 with S:G261R[https://github.com/cov-lineages/pango-designation/issues/1930](u…