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Hi,
Thanks for developing freddie tool!
I was trying to apply freddie to our cancer dataset, however, currently I'm experiencing some issues.
1) Our data are nanopore long reads and previously w…
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Microbial Similarity and Preference for Specific Sites in Healthy Oral Cavity and Esophagus
https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2018.01603/full#F2
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Can you add the chicken new genome assembly (http://ftp.ensembl.org/pub/release-107/fasta/gallus_gallus/ and ) to browser? The previous assembly (galgal6) supported by the browser missed many chromos…
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https://ming-lian.github.io/2019/08/19/Bioinfo-ML-Club-6th/
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Dear ‘ROSE’ developers,
Thank you very much for developing ‘ROSE’! It is of a great interest for us to be able and use your software for discovering super enhancer within our system and we would be v…
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Previously there was a potential 3-BP GJ.1.2/JN.3.2.1 recombinant in #991, and now it gets company in another country.
JN.3.2.1--GJ.1.2--JN.3.2.1--GJ.1.2
Breakpoint 1 between 2940 and 3430
Brea…
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Hello! I am trying to generate the count matrix for the islet cell snATAC data by running **snATAC_pipeline.py** with fastq files pulled from GEO.
Unfortunately I am unable to run the whole pipelin…
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hey!
thanks for developing and maintaining TCGAbiolinks
it made live so much easier... till yesterday...
than i ran into a GDC accessibility issue, which i couldn't resolve based on other suggest…
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As visualization is not straightforward we strongly feel that it needs prototyping. Thus, we have decided to implement it as plugin for IGV.
We need to make some architectural decisions, so we need y…