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I propose 2 XBB.1.9.1* sublineages with S:E554K
Branch A: 61 seqs
Defining mutations: XBB.1.9.1>G23222A (S: E554K)
GISAID query: Spike_E554K, -Spike_A701V, G5720A, C11956T, -G2235A, -G2174A, -…
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My attention was caught by a recent brazilian sample carrying S:V16F S:A344V, S:R403K and S:F456L (EPI_ISL_17879723) when i discovered that despite belonging to XBB.1.18.1 was not a FE.1 family but ac…
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transferred from : https://github.com/cov-lineages/pango-designation/issues/1957
While checking XBB.2.3.5 i spotted this very recent sublineage of XBB.1.9.1 that acquired S:T478N and seems spread…
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The `Batch` entity within CDx is missing some data to be complete in regard to the data that needs to be uploaded to NIH.
These new columns need to be added to batches:
- reference_gene: all the c…
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This Spanish sequence looks like an XBB.2.3/DV.7.1 recombinant with breakpoint exactly between 22017-22031 (both ends inclusive).
Seems to be missing from Usher tree due to QC? @AngieHinrichs
hC…
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I spotted a sublineage of XBB.2.3 defined by N:T166I **(NOW DESIGNATED XBB.2.3.6)** that further acquired S:P621S and spread in Singapore
Defining mutations: **(EDITED)**
XBB.2.3.6 **(N:T166I (C28…
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There may be a XBB.2.3.2 sublineage with ORF1a:T2977I (C9195T; NSP4:T214I) after G24193A and C26228A first detected in Singapore.
As of 2023-04-14, Cov-Spectrum reports 93 good-quality (135 total) …
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- [https://github.com/cov-lineages/pango-designation/issues/1932](url)提到:韩国上报了1例,而中国上报了许多
- BQ.1.1.13 with S:L176F
![image](https://user-images.githubusercontent.com/125779492/233644102-c179c294-d…
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I propose for a rapid review this sublineage pre proposed originally here: https://github.com/sars-cov-2-variants/lineage-proposals/issues/96
The input to find this was an anomaly spotted by a twit…
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**Defining Mutations:** _On top of XBB.2.3.6's [T22843C > C7105T > C1063T]_ > G12315A(ORF1a:R4017K) > G26834T > C9561T(ORF1a:S3099L) > T22726A(S:N388K)
**Query:** C9561T, T22726A
**Earliest seq:** 2…