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I am looking through the spladder generated HDF5 files from this study:
Comprehensive Analysis of Alternative Splicing Across Tumors from 8,705 Patients
Specifically, I am looking through this fil…
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Dear all
I like this tool a lot and i decide to use this tool as my alternative splicing analysis tools in my paper.
but I don't understand the parameters of '- g' & '- i' in this tools.
Actually, …
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**Is your feature request related to a problem? Please describe.**
Yes.
I would like a better ability to control print parameters to develop print profiles. Things like "extra prime after restart" h…
AbeFM updated
5 years ago
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**Is your feature request related to a problem? Please describe.**
The current implementation of in-place side transitions emits a single gcode extrusion command. I have had this repeatedly cause fai…
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I am running on my real data, but I got an error from "mikado pick" step, which mentioned in this issue. I see you mentioned that it looks like a proper bug? How should I figure out? I did not meet th…
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Hi ,
I have been running mikado on the new tomato genome (size : 1.01 Gbp). It finished the mikado prepare step. However it has been running mikado serialize for quite a long time now. Also I have …
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Hi - I am interested to use SUPPA to do differential splicing analysis on drosophila melanogaster and I have been working through the tutorial. I am getting this error when I run
$ suppa.py psiPer…
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Hi all,
I ran spliceAI with the following parameters: `spliceai -I 0000.vcf -O out.vcf -R hg19.fa -A grch37`. The output vcf is exactly identical to the input vcf. Also the column with the delta sc…
ghost updated
4 years ago
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thanks for this powerful tool.
I have two questions,
if I intall from git clone, and do the perl install.pl to install an old version before.
and now I want to install from conda of a new versio…
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Hi,
Thank you very much for developing such a useful piece of software. I'm running the latest version of Mikado (2) and I'm encountering a parsing problem with an XML diamond BLAST file. I'm runni…