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It looks that for a given training sample, there were some issues with the bounding boxes. As it's difficult to find out which exact sample generated the error, I was wondering where the exact problem…
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annotation_map_tile is amazing because it allows the addition of basemaps, without needing a non-fully-ggplot2 syntax as in ggmap. however, when rending an animation with both packages, it seems that …
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Could be downstream of https://github.com/tidyomics/genomics-todos/issues/1
Work through multi-sample multi-condition differential test using pseudobulked counts, a la a hybrid of `muscat` and `csaw`
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I'm having an issue with training Yolov4. I convert XMin, XMax, YMin and YMax into the Yolo format with the following code:
X = XMAX
Y = YMAX
x_diff = int(XMAX/2)
y_diff = int(YM…
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Hello, I'm glad to see that this repository has provided the annotated results table for the second version of tuberculosis drug resistance, which is highly relevant to our current work. Our research …
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Hi,
Thanks for Scenic+.
I am running the Scenic+ and getting an error on my data as well as the pbmc data after running
`from scenicplus.wrappers.run_pycistarget import run_pycistarget
run_p…
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I'd like to be able to export my starred results as a CSV in particular.
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I have human RNA-Seq dataset it has two different barcodes in the different folder. I aligned with that command
minimap2 -ax splice -uf -k14 ref.fa direct-rna.fq > aln.sam
I try to quantify and coun…
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The `fit_average_densities` command takes an indirect input which is `realigned_slices_ccfv2.json` via `fit_average_densities_ccfv2_config.yaml ` (see https://github.com/BlueBrain/atlas-densities/tree…
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Currently `PharmacoDB.uid`s with duplicated `reactome_id` entries are handled simply by using the first `reactome_id` that appears in the `reactome_compounds.csv` file.
To preserve the multimapping…