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This can (and has) caused hard to detect bugs and should be avoided. Many of these were fixed in xref https://github.com/galaxyproject/galaxy/pull/11121, which adds updated eslint tooling to catch th…
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It would be nice if we could read Galaxy's config in (somewhat) external scripts (like https://github.com/galaxyproject/galaxy/issues/13383) and in gravity, without having to bring in galaxy.model an…
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Flow cytometry fcs files have a long text header before the binary portion starts (https://en.wikipedia.org/wiki/Flow_Cytometry_Standard), in particular an example there has the binary data starting a…
pcm32 updated
3 years ago
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@mvdbeek and I were investigating unstable integration tests in dev. Too many postgres connections are used.
He enabled some extra logging here:
https://github.com/galaxyproject/galaxy/pull/8439
…
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The right workflow shows a concat tool that can take `n` input files. If I use this workflow as a subworkflow (the left image) I can not insert multiple input files. The output from `get_pos_data` is …
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I get the following error installing the 'kraken' part of the devteam kraken tool from the tool shed:
```
In file included from krakendb.cpp:20:
./kraken_headers.hpp:36:10: fatal error: 'omp.h' file …
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Things are starting to look pretty nice with the new apply rules tools and the various rule-builder variants, but there are still a couple of things that I think we should address:
- [x] Collection…
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Shouldn't it be possible to uninstall a tool?
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The reference genome is not displayed in the workflow editor. So I guess this needs to be a special cased in the editor. This is what we get after running the workflow. Rereunning the crashed tool wor…
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I've seen this error reported every so often on the mailing list, but couldn't find an issue on it:
> An error occurred setting the metadata for this dataset
> Set it manually or retry auto-detect…