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Hi there,
I really enjoy your tool! It's been very helpful for me, as I've been annotating the genome of a less common model organism. I am annotating a new version of the genome that was just sequ…
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Dear Developer, Can I use TOGA to find out the missing and added genes in the query sequence relative to the reference sequence?If so, which result file should I look at?
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Hi,
Thanks much for the ma-focus software!
We have successfully run focus on one ancestry using our QTL data and public gwas. However, we had issues when we tried to run ma-focus on two ancestries …
arkyl updated
3 months ago
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## Python script to run DE analysis
**5.5/6**
| Exercise | Points Possible | Grade |
| -------- | --------------- | ----- |
| Implementation of manual DE test | 1 | 1 |
| Manual DE test on al…
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Hey,
Currently the visualisation seems to have some errors and provides no output.
Best,
Tom
`mobmess visualize -s test-contigs.fa -a test-contigs-annotations.txt --contigs $contigs --thread…
thh32 updated
2 weeks ago
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### Description of the bug
With test data, volcano plots in interactive reports show differential genes in orange. With my own data, the workflow completes without error, but, as shown in the followi…
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Hi @vdemichev,
Hi my log shows the following:
[0:00] Loading spectral library phl004_canonical_sall_osw.csv
WARNING: no neutral loss information found in the library - assuming fragments withou…
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As reported in https://github.com/NCATSTranslator/Feedback/issues/953, [UMLS:C0920288 "C-KIT Gene"](https://uts.nlm.nih.gov/uts/umls/concept/C0920288) should be a synonym of [NCBIGene:3815 "KIT"](http…
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The [first pass](https://github.com/data-refinery/data-refinery/issues/97) of hypothetical user stories include many which require both sorting by and filtering by specific genes.
Our current outpu…
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Hi, Dongyuan! I have a question about generating scRNA-seq data using gaussian family.
When I generate scRNA-seq data with gaussian family like the code below
```
example_data