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**Is your feature request related to a problem? Please describe.**
kWaveFirstOrder returns a variety of values depending on the simulation configuration. The logic of which values are returned, how t…
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Presently, SED-ML supports four specific types of operations on models
- SteadyState
- OneStep (of a time course)
- UniformTimeCourse
- Parameter estimation
This excludes many other types of an…
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1. How do we account for different time-step sizes?
2. How do we account for different processing conditions?
3. How do we visualize variation over time?
4. How do we account for differing numbers of …
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@slochower shared the following script with me, which seems to touch on some very useful areas.
We should polish in into a full-fledged example!
Some complications toward making this into an exa…
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Good day,
For a learning project, I am working with Solo8 and Solo12. During the learning process, I have found it very useful to enable self-collisions during simulation, as the impacts generated…
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Hello all,
Very happy with the tools - thank you for maintaining them and integrating with LAMMPS. I am running some vacuum simulations and while increasing the number of GPUs (and mpi ranks), I r…
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**Summary**
I use rerun to calculate nonaffine displacement by using fix nonaffine/displacement command, but results give all zero value for this fix calculation when I dump it.
**LAMMPS Version…
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Hi there,
I am using Cycles to explore different reactive management policies.
Ideally, I would like to simulate the growth process for a given time interval (e.g. a day or a week), check the cur…
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OK, So, We are using a pretrained model for metagenome simulations, We have a standard read count and 2 samples are getting generated, however when we are changing the no. of species that should be in…
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Here the target to process the point cloud generated after simulation,
The first obvious step would be to visualize th point in 2D and 3D.
and make write some outlier detection algorithm to remove …