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Hi, I got the following error when creating the wheat genome index
```
Build index for the reference.
Kmer length: 17, window size: 7
Reference file: 161010_Chinese_Spring_v1.0_pseudomolecules.f…
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Discussed at length on AssemblerGames, but adding here for tracking. There seems to be timing issues when using a US Dreamcast modem that reduce the odds of a successful connection to about 1 in 3. So…
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Hi there,
I am currently trying to train BPNet on some human ChIP-seq data we have for an RNA Pol III transcription factor. We have multiple cell lines that I would like to use as tasks for the mod…
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Missing task to extract the whitelist and the xstring from seqspec
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Hi,
I find ANANSE rather useful in inferring regulatory interactions. I would like to use it to connect the peaks to the target genes directly. Is there a way to do that? Can I somehow extract the p…
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There are times where you want to generate a UUID or a timestamp in the header to be able to track a request. Would be nice if we could do {{UUID}} or {{TIMESTAMP}} to automatically generate this and …
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- [x] Can we give names to the download table from this page. Currently they are just table.tsv (Jonathan - use downloadFileName prop)
- [x] In the downloaded files DNase H3K4me3, and H3K27ac have ro…
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## **Describe the bug**
Peak size appears to be fixed with a few exceptions.
Of the 15598 idr.optimal peaks, all but 13 have the size 740bp.
I would like to know if this is expected or if there is …
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Hi Mayur,
I tried running my files for the differential expression analysis. had this error. I tested with your files and the error seems to persist. have you faced this before? can I somehow know …
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Thanks for your great work! I am a grad student in Anshul Kundaje's lab and would like to propose adding the dynseq track to IGV which we have discussed briefly with @jrobinso on some of the ENCODE ca…