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I am getting the following error in the qa script in Python 3 using version 0.7.2:
```{bash}
Traceback (most recent call last):
File "", line 1, in
File "/Users/Julian/Anaconda/envs/imfusio…
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I want to know why htseq-normalization doesn't seems to work. Apart from that
These code was found in the manual. Do you thinks its an error in manual. Is it matrix data which should be normalized ?…
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This is my first time doing any sort of bioinformatics data analysis and working with kitematic. When I attempt to "Download & Prepare" the GDC Molecular Data as a "SummarizedExperiment", there is an …
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Hi
I am trying to build a snap package on Ubuntu that includes HTSeq. It seems to be the only thing that won't work. I get the following error:
```
Setup script for HTSeq: Failed to import 'numpy…
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Hello,
Is there any way I could convert a Summarized Experiment object into a usual matrix format?
I am seeing the layout (samples on columns and genes on rows) that I want with datatable functi…
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Hi.
I did wanted to use the executable template for DESeq2 "template_script_DESeq2_CL.r" on RNA-seq data from a TGCA cohort. The files are in RSEM count, and I get the following :
Error in loadC…
Cdk29 updated
7 years ago
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Hi,
I was able to build and install salmon on my mac, but it's giving me this error when I try to run it:
salmon
dyld: Symbol not found: __ZNSs4_Rep20_S_empty_rep_storageE
Referenced from: /…
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Hi,
I have a bcbio installed with GRCH37. Now that I have a client who is intersted in mm10. I was trying to do python bcbio_nextgen.py upgrade --genomes mm10 and I ran into Import Error for single…
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We getting more and more requests that workflows do not put datasets into the history for hours, a few users have encountered a 24h delay.
We do have this setting enabled [`history_local_serial_wor…
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Tried installing a bio package which failed, I reverted to using foss-2016a which worked. Filed it in the back of my head to report back if it failed again, which it did. The first time (it was for …