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Thank you for your highly intuitive and accurate tool!
Recently, I plan to apply Bambu to my single cell RNA sequencing data to get transcriptome information.
So, as I think, it is possible to con…
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I have installed `sra-tools` v3.0.10 distributed from Bioconda for **linux-64** platform. Running `fasterq-dump` occupies far more RAM than the flags would imply (default 100 MB/core) or I have ever e…
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Hi Ian and Tom,
Hope you are well.
We are running a splice junction analysis using human plasma samples processed on a Novaseq 6000 ( RNA sequencing with UMIs).
Analysis Pipeline in brief :
…
SJJHK updated
2 months ago
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https://mp.weixin.qq.com/s/5kwfiapfBKVSQmo5Zuh6EA
ixxmu updated
1 month ago
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A first pass of the JSON schema is in the Mash repo:
https://github.com/marbl/Mash/blob/master/src/mash/schema.json
For now, I put k-mers as a separate array parallel to hashes rather than an arra…
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https://mp.weixin.qq.com/s/j6yrLYqaV4Cz7sFCTrevUA
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Hi,
I could not get the information of EPICv2 from `ExperimentHub(localHub=TRUE)`. I don't undartand where is wrong for me. Any help!
>packageVersion("sesame")
[1] ‘1.17.11’
packageVersion("se…
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https://mp.weixin.qq.com/s/XK9Jte3ocPvvxTQPIkkz7g
ixxmu updated
2 months ago
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Hi Author, I am getting the following error with the function libraryDataGet
> snapshotDate(): 2022-04-26
> snapshotDate(): 2022-04-26
> see ?FlowSorted.Blood.EPIC and browseVignettes('FlowSorted…
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Hi there,
I have long read RNA-seq data from the minion platform. I'm trying to plot gene body coverage of these reads. Is there a reason this data wouldn't be compatible with the QoRTs java applica…