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Hello, would it be possible to make `samtools consensus` output two diploid consensus (i.e. two sequences, one for each haplotype) rather than one sequence with heterozygous sites? I have whole genome…
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Hi,
I am relatively new to racon. I am trying to polish noisy long reads (pacbio) using hi-fidelity long reads (pacbio).
I am using pbmm2 (SMRT C++ wrapper for minimap2's C API) for alignment:
…
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This issue is intended to track discussion and summarize decisions regarding how to format ICD model files, and incorporate them into our Doxygen documentation. The checklist at the top indicates prop…
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```
In as much detail as possible, please describe what you would like to see.
1. Adding notes by clicking on the music staff
-When you hover over a the staff, a 'ghost' note appears and follows your…
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On-demand functionality present on the relay chain, which means technically on-demand is implemented.
1. Someone places an order.
2. Parachain sees scheduled core and produces a block.
This wor…
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Hello,
im encountering a similar issue to #1681. After completing the Dada2 pipeline according to the tutorial, i created a phyloseq object, but in doing so i loose reads in almost all my samples. …
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Four suggestions based off of 8c24fb15335825bc54d3548db23009c1ca479711:
1. The "-h" or "--help" options get a strange error. If they aren't implemented, then shouldn't the tool complain "no such o…
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Hi all,
There was a recent [question posted to the QIIME forum](https://forum.qiime2.org/t/vsearch-de-novo-output-uc-option/16697) that got me thinking about why the results might differ between ru…
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One of the problematic data sets is analysed here:
/mnt/gpfs/Hackathon/StrainMetaSim/CoAssembly55
The binning is very poor prior to merging. Just 9 good bins at 75% completeness. See file:
cl…
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**Describe the bug**
When trying to create the "strandcount" tables from bam files I get the following error:
```
./my-data/step0-input/iii-13-13MT2EXPIIIVP10FullRepseq25052018_S1_L001-sorted.b…
Al313 updated
9 months ago