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snakemake 5.31.1
I ran my workflow with success a first time
```
snakemake --configfile config/config_test_rapidrun.yaml -s Snakefile --cores 8 --use-conda
```
and then I ran again my workflow …
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In the currently available SBOL examples the `encoding` tag within the `sequence` tag is specified after the end of the `elements` tag. This is problematic for streaming parsers since they then have t…
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Like this
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Hello, I want to search a sequence in my alignment with a reference genome but an error appears every time with the reference genome of pichia pastoris yeast, it says not found in blat server.
Ou…
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Hello,
I have abra2 integrated in a snakemake workflow for variant calling and it usually does a great job. With my current dataset on Maniok esculenta, however, Abra2 exits with error(s). Attached a…
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Hi~ Thank you for this wonderful work, i would like to know about an issue i came across.
KIR3DL3, KIR3DP1, KIR2DL4, and KIR3DL2 are four frame kir genes which in principle every individual should h…
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The rough idea Eric and I discussed is two new core functions: upgrade() and validateUpgrade().
upgrade() would update the DNA in the local chain and install new source files into the file system, an…
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Hi:)
I ran kraken2.1.2 for my mice gut microbiome shotgun metagenomic analysis. I built a custom db by using the following command
```
kraken2-build --download-taxonomy --db refseq
kraken2-build …
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Thinking about DNA quantity, targets, and cost I would like to develop a Diagram that outlines meth-seq options.
Given @yaaminiv is in thick of this, could you please start this. Things we should con…
sr320 updated
5 years ago
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Dataset: https://obis.org/dataset/62b97724-da17-4ca7-9b26-b2a22aeaab51
Protocols: https://mbari-bog.github.io/MBON-Protocols/
I think these would fit under [`samplingProtocol`](https://dwc.tdwg.or…