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I am running ampliseq version 2.4.1 to analyze Illumina single end reads from 16s rRNA sequencing data.
I have a total of 794 samples. The sever i am running the analysis has a memory of 125 GB .
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Hello,
Thanks for developing wonderful tool.
I had a few questions and would really appreciate your insight.
1) I have BCR sequencing conducted by Mi-seq, which are not one of the presets.
In …
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Hello, it looks like TrimGalore does not automatically perform polyA/T removal (see post-trimming fastqc screenshot below)
). They have an experimental option to do so (https://github.com/FelixKruege…
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### Data Owner Name
Human PanGenomics Project
### Data Owner Country/Region
United States
### Data Owner Industry
Life Science / Healthcare
### Website
https://humanpangenome.org/
### Social M…
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### Data Owner Name
Human PanGenomics Project
### Data Owner Country/Region
United States
### Data Owner Industry
Life Science / Healthcare
### Website
https://humanpangenome.org/
### Social M…
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Hello,
I am trying to run chisel on whole genome sequencing data, but I keep getting this error in the alignment of simulated sequencing reads step:
```
[2023-Feb-14 15:55:51]Aligning simulated s…
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Hi, jiarong! Thanks for the excellent software!
The test dataset worked well after installation.
The server I used is Linux version 3.10.0-862.el7.x86_64 (builder@kbuilder.dev.centos.org) (gcc v…
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Hi,
it would be very helpful if you could provide an example project info file as the instructions are a bit unclear about what it should look like if one has multiple plates/lanes in the paired-en…
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Dear @davidebolo1993 ,
Thanks your for this useful tool. I have a question about simulating illumina sequencing data using VISOR SHORtS. Firt, using the same insertion bed file for simulating long-re…
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Hello!
Recently, while I was researching metatranscriptomics, I came across the metaGT tool that you developed. I am writing to inquire if there is a specific manual for metaGT available. I have re…