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marbl
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merqury
k-mer based assembly evaluation
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meryl-lookup failed (# Per seq QV statistics for haplotype 2)
#132
theahettasch
opened
1 week ago
1
"no module file for 'bedtools', no package 'argparse'"
#131
olympus-terminal
opened
1 week ago
1
error with finding bedtools and argparse
#130
olympus-terminal
closed
5 days ago
1
order of mat and pat
#129
olympus-terminal
opened
2 weeks ago
1
Help with interpreting spectra-cn and spectra-asm plots with Illumina WGS reads
#128
kaede0e
closed
3 weeks ago
3
Error in f(...) : Graphics API version mismatch
#127
ksc289
closed
3 weeks ago
2
Completeness, Switch Error？
#126
DayTimeMouse
opened
1 month ago
1
Qustion about Spectra copy number analysis
#125
Iven-gif
opened
1 month ago
1
improve phase block
#124
LGG02
opened
2 months ago
1
The QV value about T2T will be lower
#123
zongzone
opened
2 months ago
5
How to deal with Hifi, Ont UL, and hic data together?
#122
hanqu24
opened
2 months ago
7
Is there a script to rerun the plot?
#121
Axze-rgb
closed
3 months ago
4
I don't understand how to get the right K mer size
#120
Axze-rgb
closed
3 months ago
2
What are the spectra-asm in case of a single assembly?
#119
Axze-rgb
closed
3 months ago
1
Failed to Open Assembly File in Merqury
#118
XingzhengLee
closed
5 months ago
2
USE case: long accurate reads
#117
Axze-rgb
closed
5 months ago
1
New release for Merqury
#116
LiaOb21
opened
6 months ago
4
Trio binning: parents (Illumina) + hybrid (Hi-Fi). How can I check parenthood?
#115
carolhsb
opened
7 months ago
1
R execution errors and no plots
#114
splaisan
closed
7 months ago
0
Handling of assembly gaps
#113
cabbagesofdoom
closed
8 months ago
2
spectra-cn plots and QV stats not generating
#112
LaurenHuet
opened
8 months ago
1
Don't have maternal and paternal sequence data, how to build hap-kmer
#111
socialhang
opened
10 months ago
1
even number k-mer size
#110
hui-liu
opened
10 months ago
1
Error in read.table(dat, header = F) : no lines available in input
#109
scthree
closed
6 months ago
4
Is high heterozygosity autotetraploid suitable?
#108
jia-wu-feng
closed
11 months ago
2
Does calculating the compressed k-mers have a great impact on the QV value?
#107
XXH123a
closed
9 months ago
1
Error when running
#106
JennyCNS
closed
9 months ago
2
R plot doesn't seem right
#105
JennyCNS
closed
9 months ago
5
could not installed the meryl ,and the thereis no file discovered the compile
#104
Jiangjiangzhang6
closed
1 year ago
2
Low or incomplete k-mer completeness?
#103
GuillaumeHolley
closed
1 year ago
2
Odd Spectra.asm plot generated
#102
ap1438
closed
1 year ago
5
How to get best k for genernate read-db.meryl?
#101
cjchen5
closed
1 year ago
1
running merqury.sh, error is "merqury-1.3/eval/spectra-cn.sh: line 24: meryl: command not found"
#100
zhaoyuhe-zyh
closed
9 months ago
2
Could we use Nanopore Q20 reads to construct the meryl dbs?
#99
zmz1988
opened
1 year ago
2
meryl-lookup error
#98
SaiReddy-A
closed
1 year ago
7
CN designation clarification
#97
jwcodee
closed
1 year ago
4
Segmentation Fault at meryl-lookup
#96
kneubehl
closed
1 year ago
2
QV is inf
#95
lnyawen
closed
1 year ago
7
Spike at 0 pos in CN plots
#94
jwcodee
closed
1 year ago
2
completeness.stats column explanation
#93
mictadlo
closed
1 year ago
1
Use case: nanopore-only genome assembly
#92
nmflack
closed
1 year ago
2
Use of merqury for illumina paired end reads fot trio binning
#91
ap1438
closed
1 year ago
2
Low completeness, high QV
#90
mpalmada
closed
1 year ago
2
R ERROR
#89
woodoo46
closed
9 months ago
2
meryl-lookup - where is the script?
#88
LandiMi2
closed
1 year ago
2
merqury.completeness.stats empty
#87
mictadlo
closed
9 months ago
6
Can't interpret 'fastp/*.meryl': not a meryl command, option, or recognized input file.
#86
mictadlo
closed
1 year ago
0
Rscript execution error
#85
Raina-M
opened
1 year ago
2
Understanding what total represents in different output files
#84
priyanka-surana
closed
9 months ago
4
Merge compression branch
#83
arangrhie
closed
1 year ago
0
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