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marbl
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merqury
k-mer based assembly evaluation
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No resulting plots..
#82
kwiyounghan
closed
1 year ago
2
NG block
#81
duhuipeng
closed
1 year ago
2
K-mer comparison density plot
#80
dirkjanvw
closed
1 year ago
2
Adjusting plots of spectra plots
#79
LandiMi2
closed
1 year ago
1
QV i n some chr is +inf
#78
HaoWangLYL
closed
9 months ago
3
How to get blob plots
#77
Overcraft90
closed
2 years ago
17
ccs.bam, fasta assemblies and meryl dataset
#76
Overcraft90
closed
2 years ago
3
Merqury or Merfin?
#75
JohnUrban
closed
2 years ago
3
bining Hi-C reads
#74
zhoudreames
closed
1 year ago
1
Multiple reads datasets as meryl input
#73
Overcraft90
closed
2 years ago
1
First peak identified as read-only
#72
gubrins
closed
2 years ago
2
False duplications
#71
m-jahani
closed
1 year ago
3
Single diploid individual quality estimates and completeness
#70
Overcraft90
closed
2 years ago
4
wig instead of tdf and haplotype phasing
#69
olechnwin
closed
2 years ago
1
Error in zero_range(range) when plot spectra-asm
#68
xiaoaozqd
closed
1 year ago
1
how can I get spectra-cn reads only plot
#67
olechnwin
closed
2 years ago
8
10x chromium barcode trimming
#66
sstwins21
closed
9 months ago
3
Merqury does not generate results when increasing k-mer size
#65
bistace
closed
2 years ago
10
completeness file is empty
#64
cell-c
closed
2 years ago
2
percentage of heterozygosity
#63
m-jahani
closed
2 years ago
1
can i use 10 illumina data to assess my assembly QV value ?
#62
zhoudreames
closed
2 years ago
2
The switch error rate is high
#61
jinxin112233
closed
2 years ago
5
Does merqury output phased block NG50 ?
#60
HaploKit
opened
2 years ago
2
asm.st.png vs asm.fl.png plot
#59
B10inform
closed
2 years ago
4
QV of +inf
#58
foreignsand
closed
2 years ago
6
Differences between reporting solid kmer or hapmer based completeness for trios
#57
ASLeonard
closed
2 years ago
4
Need to add path to /util folder ?
#56
aureliendejode
closed
2 years ago
2
Phase_hapmers.blob
#55
duhuipeng
closed
2 years ago
1
How to understand the error rate
#54
zmz1988
closed
2 years ago
2
Phase
#53
duhuipeng
opened
3 years ago
9
Help in a weird spectra-cn.fl.png, QV and C interpretation
#52
Unalibun
closed
2 years ago
4
No plots generated
#51
zmz1988
closed
1 year ago
10
Meryl-lookup runs single threaded in phase_block regardless of thread count
#50
ASLeonard
closed
3 years ago
2
Merqury installed with conda
#49
max1c
closed
1 year ago
3
Quality value equal to Inf
#48
bistace
closed
3 years ago
3
Error when running
#47
boucherufl
closed
2 years ago
13
Whether high ploidy affects the assessment of completeness
#46
jinxin112233
closed
3 years ago
8
kmer completeness file empty
#45
unnatisonawala
closed
3 years ago
2
Interpreting the new wig files for QV and hapmer density
#44
ASLeonard
closed
3 years ago
5
Getting a bed file of kmers in assembly but not in reads
#43
mwykes
closed
3 years ago
2
exclude read for HiC scaffolding
#42
baozg
closed
3 years ago
2
The words on the picture are garbled
#41
YiRan0220
closed
3 years ago
4
Difference in 2 and 3 copy kmers between read data sets
#40
SheepwormJM
closed
3 years ago
8
Error reported when run meryl, but looks like it has run fine
#39
SheepwormJM
closed
3 years ago
3
QV at +inf
#38
francoissabot
closed
3 years ago
7
Completeness stats too high, filt count much too high...
#37
SheepwormJM
closed
3 years ago
3
Limit threads
#36
StevenBai97
opened
3 years ago
3
Issue with link...
#35
francoissabot
closed
3 years ago
2
hap_blot
#34
duhuipeng
closed
3 years ago
5
Hap_blot.sh
#33
duhuipeng
closed
3 years ago
11
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