-
We won't be able to consider our initial new graph complete without gene to phenotype associations capturing from the major model organisms.
Pulling from Alliance phenotype submission files (https…
-
The modelling discussed in #1 could be improved. As suggested by @nlwashington, here is another way to model these relationships:
```
Monarch:DiseaseID is an OWL Class
Monarch:Disease rdfs:l…
-
https://github.com/joebowen/model_completion_dashboard/blob/master/pyopenworm/views.py#L140
The EVIDENCE_DICT dictionary at line 140 ends up with 5 entries that each look like:
```
'0': {'author': […
-
Described in the maize literature as "seed set length". It corresponds to the average length along cob where there are kernels. This may exclude the tip of the cob and/or the very base of the cob. See…
-
Hi Jan:
I downloaded pre-made sgRNA library FASTA file (Sabatini lab; PMID 26472758) from the Help section. What is the regular expression I should use? I chose the first regular expression option …
-
- [ ] Articles are cancer relevant
- [ ] Articles should related to searched gene
- [ ] Deploy the script to production so run on weekly basis
-
We have 38,140 annotations to Prunus persica genes/gene products. Links to GDR are not working and there is no PubMed id listed.
Example: https://browser.planteome.org/amigo/gene_product/GDR:ppa0…
-
Nothing fancy. If you have pubs (presentations, books, datasets) put them in with a type a title, a doi.
Might require ORCID as the enum key.
-
Single SGD annotation - tethering in a MF, and in the paper annotated, it is described as a MF (PMID:26283797).
-
pmid 1517 1537 and 1538 have very high ct (cumulative time) values.
At least for 1517 (file "7 ALFAM2_LI94_INCORP v5.xlsx" first row 396) the problem seems to be an error in manure application time…