boutroslab CRISPRAnalyzeR issues

boutroslab / CRISPRAnalyzeR

CRISPRAnalyzeR: interactive analysis, annotation and documentation of pooled CRISPR screens

GNU General Public License v2.0

80 stars 31 forks source link

issues

Newest

Newest Most commented Recently updated Oldest Least commented Least recently updated

Sorry, CRISPRAnalyzeR had trouble communicating with E-CRISP / Re-evaluation tool.

#68 geng-lee opened 2 years ago
0
The ENSEMBL biomaRt web-service seems to be offline. How can I solve this problem？

#67 geng-lee opened 2 years ago
0
deal with pair-end fastq

#66 ChaoXu1997 opened 3 years ago
0
Web interface is not working

#65 bibb opened 3 years ago
1
Disconnected from Server

#64 andrewucla opened 4 years ago
1
No access to http://localhost:8000/CRISPRAnalyzeR/

#63 Le-Yimi opened 4 years ago
1
Frozen at 91%

#62 acuadros1 opened 4 years ago
3
Exporting annotated P-value vs LFC (MaGeCK)

#61 jmgl32 closed 4 years ago
0
CRISPRAnalyzeR website down

#60 sarah-sarah closed 4 years ago
2
docker container & fastq

#59 chrispam416 opened 5 years ago
3
Docker Desktop for Window can't be setup on my PC, double click shows no response, anyone can help? If possible, please send me a copy of it to 417461889@qq.com. TKS A LOT!

#58 lin2690 opened 5 years ago
0
All count of sgRNAs are 0 while more than 90% reads mapped to library

#57 frankzelph opened 5 years ago
1
Shiny Dashboard App Deployment Issue

#56 umernaeem1 closed 5 years ago
0
Require a public IP address to access the port 8000 - to solve "Disconnected from server issue"

#55 18792823 opened 5 years ago
2
DeseQ in CRISPR analyzer and caRpools

#54 pk-on-github opened 5 years ago
0
Mismatch between readcount files and quality report file

#53 sklarz-bgu closed 5 years ago
1
regex underscore bug in script which produces FASTA_GeckoV2_all.fasta

#52 stachyra opened 5 years ago
0
Settings mistake in CRISPRanalyzer

#51 ericalix opened 6 years ago
0
Update MAGeCK to v 0.5.7

#50 larrywei opened 6 years ago
1
ERROR: An error has occurred. Check your logs or contact the app author for clarification

#49 larrywei opened 6 years ago
13
Repeatedly disconnected from Server

#48 larrywei opened 6 years ago
4
link to pre-made sgRNA FASTA file from Brunello library is not working

#47 JoseEspinosa closed 6 years ago
2
Unable to visualize or download data--Repeatedly disconnected from Server

#46 mfwells5 opened 6 years ago
2
Unable to load data - disconnected from server

#45 jacboero closed 6 years ago
3
CRISPRAnalyzer analysis step repeatedly stalls at 9%

#44 laillern closed 6 years ago
4
lentiCRISPv2 wrong regular expression

#43 jacboero opened 6 years ago
1
CRISPRAnalyzeR doesn't run on mac with Docker

#42 yeroslaviz opened 6 years ago
2
CRISPRAnalyzeR vs. caRpools

#41 yeroslaviz closed 6 years ago
1
the link to the toolbox is wrong

#40 yeroslaviz closed 6 years ago
3
Pre-Made sgRNA library FASTA file error

#39 smart0611 opened 6 years ago
5
Looking for the solution to several problems: Disconnected from the server and abnormal counting results.

#38 Beardancer opened 6 years ago
3
CRISPRAnalyzeR crashed for the sample data

#37 xuguorong2016 closed 6 years ago
4
Can CRISPRAnalyzeR be installed on AWS instances?

#36 xuguorong2016 opened 6 years ago
9
biomaRt gene conversion currently does not work

#35 jwinter6 closed 6 years ago
1
Large FASTQs causer server disconnect

#34 jecorn opened 6 years ago
3
Analysis without biological replicate

#33 deb-m closed 7 years ago
3
Screens without replicates

#32 khayer closed 7 years ago
1
Error while using the "FASTA_Brunello.fasta" file during analysis

#31 deb-m closed 7 years ago
1
CRISPRAnalyzeR container crashing during "Check Upload" step

#30 deb-m closed 7 years ago
6
crash while creating FASTQ quality report

#29 amayer21 closed 7 years ago
3
Brie Library Fasta "repeated guides"

#28 Kevbot8000 closed 7 years ago
2
Brunello Library - Regular Expression for FASTQ

#27 jwinter6 closed 7 years ago
1
Default Values

#26 DarioS closed 7 years ago
1
low % alignment terminates analysis

#25 nvanduse closed 7 years ago
5
Gene Symbols in Pre-made Library

#24 DarioS closed 7 years ago
1
Custom Regular Expression Causes Extraction Failure

#23 DarioS closed 7 years ago
3
Check Files Remains Disabled After Mapping

#22 DarioS closed 7 years ago
2
Rename Files Error

#21 DarioS closed 7 years ago
0
Increased speed in FASTQ extraction and Mapping

#20 jwinter6 closed 7 years ago
4
[CHANGE in >1.141 ] biomaRt: changed attributes result in error in Hit Confirmation

#19 jwinter6 closed 7 years ago
0