boutroslab CRISPRAnalyzeR issues

boutroslab / CRISPRAnalyzeR

CRISPRAnalyzeR: interactive analysis, annotation and documentation of pooled CRISPR screens

GNU General Public License v2.0

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issues

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Sorry, CRISPRAnalyzeR had trouble communicating with E-CRISP / Re-evaluation tool.

#68 geng-lee opened 2 years ago
0
The ENSEMBL biomaRt web-service seems to be offline. How can I solve this problem？

#67 geng-lee opened 2 years ago
0
deal with pair-end fastq

#66 ChaoXu1997 opened 3 years ago
0
Web interface is not working

#65 bibb opened 3 years ago
1
Disconnected from Server

#64 andrewucla opened 3 years ago
1
No access to http://localhost:8000/CRISPRAnalyzeR/

#63 Le-Yimi opened 4 years ago
1
Frozen at 91%

#62 acuadros1 opened 4 years ago
3
Exporting annotated P-value vs LFC (MaGeCK)

#61 jmgl32 closed 4 years ago
0
CRISPRAnalyzeR website down

#60 sarah-sarah closed 4 years ago
2
docker container & fastq

#59 chrispam416 opened 5 years ago
3
Docker Desktop for Window can't be setup on my PC, double click shows no response, anyone can help? If possible, please send me a copy of it to 417461889@qq.com. TKS A LOT!

#58 lin2690 opened 5 years ago
0
All count of sgRNAs are 0 while more than 90% reads mapped to library

#57 frankzelph opened 5 years ago
1
Shiny Dashboard App Deployment Issue

#56 umernaeem1 closed 5 years ago
0
Require a public IP address to access the port 8000 - to solve "Disconnected from server issue"

#55 18792823 opened 5 years ago
2
DeseQ in CRISPR analyzer and caRpools

#54 pk-on-github opened 5 years ago
0
Mismatch between readcount files and quality report file

#53 sklarz-bgu closed 5 years ago
1
regex underscore bug in script which produces FASTA_GeckoV2_all.fasta

#52 stachyra opened 5 years ago
0
Settings mistake in CRISPRanalyzer

#51 ericalix opened 5 years ago
0
Update MAGeCK to v 0.5.7

#50 larrywei opened 6 years ago
1
ERROR: An error has occurred. Check your logs or contact the app author for clarification

#49 larrywei opened 6 years ago
13
Repeatedly disconnected from Server

#48 larrywei opened 6 years ago
4
link to pre-made sgRNA FASTA file from Brunello library is not working

#47 JoseEspinosa closed 6 years ago
2
Unable to visualize or download data--Repeatedly disconnected from Server

#46 mfwells5 opened 6 years ago
2
Unable to load data - disconnected from server

#45 jacboero closed 6 years ago
3
CRISPRAnalyzer analysis step repeatedly stalls at 9%

#44 laillern closed 6 years ago
4
lentiCRISPv2 wrong regular expression

#43 jacboero opened 6 years ago
1
CRISPRAnalyzeR doesn't run on mac with Docker

#42 yeroslaviz opened 6 years ago
2
CRISPRAnalyzeR vs. caRpools

#41 yeroslaviz closed 6 years ago
1
the link to the toolbox is wrong

#40 yeroslaviz closed 6 years ago
3
Pre-Made sgRNA library FASTA file error

#39 smart0611 opened 6 years ago
5
Looking for the solution to several problems: Disconnected from the server and abnormal counting results.

#38 Beardancer opened 6 years ago
3
CRISPRAnalyzeR crashed for the sample data

#37 xuguorong2016 closed 6 years ago
4
Can CRISPRAnalyzeR be installed on AWS instances?

#36 xuguorong2016 opened 6 years ago
9
biomaRt gene conversion currently does not work

#35 jwinter6 closed 6 years ago
1
Large FASTQs causer server disconnect

#34 jecorn opened 6 years ago
3
Analysis without biological replicate

#33 deb-m closed 6 years ago
3
Screens without replicates

#32 khayer closed 6 years ago
1
Error while using the "FASTA_Brunello.fasta" file during analysis

#31 deb-m closed 6 years ago
1
CRISPRAnalyzeR container crashing during "Check Upload" step

#30 deb-m closed 6 years ago
6
crash while creating FASTQ quality report

#29 amayer21 closed 6 years ago
3
Brie Library Fasta "repeated guides"

#28 Kevbot8000 closed 6 years ago
2
Brunello Library - Regular Expression for FASTQ

#27 jwinter6 closed 6 years ago
1
Default Values

#26 DarioS closed 6 years ago
1
low % alignment terminates analysis

#25 nvanduse closed 7 years ago
5
Gene Symbols in Pre-made Library

#24 DarioS closed 7 years ago
1
Custom Regular Expression Causes Extraction Failure

#23 DarioS closed 7 years ago
3
Check Files Remains Disabled After Mapping

#22 DarioS closed 7 years ago
2
Rename Files Error

#21 DarioS closed 7 years ago
0
Increased speed in FASTQ extraction and Mapping

#20 jwinter6 closed 7 years ago
4
[CHANGE in >1.141 ] biomaRt: changed attributes result in error in Hit Confirmation

#19 jwinter6 closed 7 years ago
0