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* pharokka version:1.6.1
* Python version:Python 3.10.8
* Operating System:Ubuntu 22.04.2 LTS
### Description
I was trying to annotate a circular phage with pharokka, the sequence only contain…
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Hi!
The paper suggests local custom BLAST databases are possible to use, and the code seems to support them, however the comment in the parameters example talks about future versions. When I try it…
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Even though i have done npm insatlled ` npm i prisma-json-schema-generator
`
**I am getting this error
/bin/sh: 1: prisma-json-schema-generator: not found**
My prisma.schema looks like this
`da…
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**Describe the bug**
The problem arise after the problem of "migration 17 was previously applied but missing in resolved migrations". When previous migration problem happened, we tried recover from it…
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### Describe the bug
The history file `~/.config/nushell/history.txt` uses the sequence `` to indicate that a command had a line break. This sequence is not escaped before writing it to the hisotry f…
x3rAx updated
10 months ago
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Hi,
For sequence dataset `from pinder.core.index.utils import get_sequence_database`, it has pdb_kind column with following types:
- ligand
- receptor
- dimer
- monomer
- predicted
How c…
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As we invest into meaningful automated warnings generated in the preprocessing pipeline step, wouldn't it make sense to keep those warnings around for the public to see as well?
For example, if the…
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Kaylee Hou
Period 3 Mortensen
[ 2a database and sqlalchemy](https://kayleehou.github.io/myproject/python/2023/03/13/AP-unit2-4a.html)
- [x] update functionality
- [x] delete functionality
-…
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Present meeting: Thomas, Karin, Håkon, Magdalena and Eve (me)
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- [ ] Prepare next meeting with the rest of the results also available, incl also snps and continue the report
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- [ ] co…
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**Is your feature request related to a problem? Please describe.**
Databases, especially in the supabase context, often need many helper functions, views, etc. That are troublesome to manage with mig…