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Hi, I've observed weird behaviour of `basecall.py` trained on RNA reads with modifications - the accuracy of base-calling is close to random (1). Interestingly, Guppy works pretty well with the same m…
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Hi Holly!
I'd like to assign taxonomy of nematode ASVs using DADA2, and so I'm working on making a DADA2-formatted file from the Silva 132 nematode database. I was wondering if you have any experie…
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**Lab-Id:** intro-python-programming-devnet-express
# Current use of Git in DNA Track:
- Presently we instruct participants to download the `devnet-express-code-samples` repo into a directory u…
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Many times when saving (either manual or autosave) the game will error - first by saying an invalid code point was reached, then if attempting to save again, it will crash out. Restarting the program …
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Hello,
I am running Canu in a High Performance Computing cluster.
I used Canu for a bacterial genome assembly (draft) successfully.
I am trying to assemble another genome, but the job has failed…
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I am trying to run the learn function with a custom 18s database (Silva.v132 trimmed with Euka02 primer, from Taberlet et al 2018).
I have put the reference data, the error and R version info below.
…
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Hello,
I have been training Chiron v.0.4.2 with a custom dataset I’ve created a model using chiron_rcnn_train.py (without any apparent issues), but basecalling against this model has been failing w…
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## Bug Report
If this is a bug report, please fill out the following form in full:
### System information
- **Linux Ubuntu 16.04**:
- **TensorFlow Serving installed from pip**:
- **TensorFlow S…
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I appreciate your approach to share the code for this amazing paper. Would you be kind enough to share the trained weights of the model
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Hello,
I installed spliceAI but I got the below error when I ran the test example. Any idea?
[ec2-user@ip-172-31-17-206 SpliceAI]$ ls
COPYRIGHT.txt examples LICENSE README.md setup.py spli…