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Lims Issue
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**Task 1**
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**Work Flow:**
- WGS PCR free v5
**Protocol:**
- TruSeq DNA PCR-free Library Prep
**Step:**
- Aliquot Samples for Covaris
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Hello, I'm using your fastGWA-glmm, it's a great tool and helps me a lot.
But currently I'm running into some problems:
My sample size is just over 300,000 and the number of SNPs is only 1037,533,…
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Hello,
i'm testing your package with my data, it's a multi-sample composed of 2 samples.
When trying to make it works trajectory_analysis i get this error :
> sce
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Hi Li,
Thank you for your prompt responses regarding my previous inquiries! Hope they did not take too much of your time.
I've been using T1K for genotyping using WGS data, as well as expression…
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Dear,
I have already test the deepsomatic to run both illumina and pacbio platform
but I have find a ambiguous result that all Pass variant is no heterozygous site ,the Pass variant is all homoz…
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Hi Tobias, I'm working on plant genomes and tried to use the germline analysis pipeline you gave to call SVs of 10× resequencing data of a panel of over 200 diverse samples. I first used delly call on…
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Hi there,
I've generated my own profile using:
aldy profile S000029_S4842Nr1.bam > panel.profile
But when I attempt to run this with:
aldy genotype -p panel.profile -g cyp2d6 S000029_S4842Nr1.…
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Hi, and thanks in advance for the help.
I'm very new with wdls and its interactions with docker. I'll tell everything I've run, then my doubts and problems.
I'm running the wdl in a local server, …
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Hello,
I am currently using ALDY for genotyping my samples, and I have come across an issue regarding the detection of insertion and deletion variants in the samples. It seems that ALDY is unable t…
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## Check Documentation
I have checked the following places for your error:
- [x] [nf-core website: troubleshooting](https://nf-co.re/usage/troubleshooting)
- [x] [nf-core/eager pipeline doc…