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For current species present in IMGT.
Also, include additional checks for xmllint crash for unknown species.
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**[Original report](https://bitbucket.org/kleinstein/changeo/issues/72) by Robert Amezquita (Bitbucket: [Robert A. Amezquita](https://bitbucket.org/Robert A. Amezquita), ).**
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http://jvi.asm.org/content/81/4/1619
sequencing classified as "sanger". Note: all sequences were supposedly obtained with an HLA-B*57:01 tetramer, but some of the individuals are actually HLA-B*57:03…
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Hey,
is there any chance to run the importFromIMGT script from windows? Using `mixcr importFromIMGT` gives `Error: Expected a command, got importFromIMGT`.
Probably difficult, as it is a shell scrip…
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```
fabio@ahmad-desktop:~$ mixcr importFromIMGT
Starting importFromIMGT.sh script
/home/fabio/.linuxbrew/Cellar/mixcr/1.8.1-1/mixcr
MiXCR v1.8.1 (built Wed Jun 29 10:35:12 CEST 2016; rev=d7c1254; bran…
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I tried the new allel finding feature. The concept is really cool and better still; very important, so props for taking it up. My experience running it was not that good though. I ran it on a bunch of…
krdav updated
8 years ago
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Hello all,
I was wondering how OptiType handles ambiguous results. I would expect that the solver returns something along the lines of "no single best solution found" or similar. Or will all best res…
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First of all, what a great tool!
I have been unable to find any contact information @hannespetur, but would like to request a feature. Right now there are only a limited number of alleles available as…
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Hi,
I see the list of the references of the multiple sequence alignment here:
http://www.ebi.ac.uk/ipd/imgt/hla/nomenclature/alignments.html
May I ask are the alleles in this list part of the human re…
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Hey,
running mixcr importFromIMGT starts the script. I get to agree to the IMGT terms. Then it will ask me to select a species. However, it shows me an error before giving me the species options that…