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The parameters
- `-algorithm:MSSim:RT:HPLC:model_file`
- `-algorithm:MSSim:Detectability:dt_model_file`
should be file parameters.
I also see the following `Warning: Unable to fetch subse…
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Previous comments and responses:
https://github.com/barbagroup/pygbe_lspr_paper/issues/11
It is fair the authors thought that some of the references are not quite related to their current study. B…
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I have ran trinity based fusion transcript denovo assembly, but I am wondering is there a way to identify the fusion break point within this transcript sequence? In another words, if I have a fusion t…
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Hi, everyone. I have followed all the steps as instructions, but when I execute the last step(I have just installed the reduced_dbs)
```
python3 docker/run_docker.py \
> --fasta_paths=T1050.fasta…
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Hi, I wanted to ask if it would be perhaps possible to add parallel/batch scoring of multiple sequences concurrently on a GPU? I am currently using the ESM1v ensemble on datasets of hundreds of sequen…
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From some of @peterjc and my discussion, it'd be nice if the Entrez module could do some sanity checking on the output and fail more sensibly than the NCBI API does.
> This performs no sanity testing…
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I tried to predict the structure of a protein that contains a selenocysteine. The unrelaxed pdb has a missing residue corresponding to the selenocysteine position and relaxation failed due to missing …
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**Are you using the latest release?**
I am using funannotate-v1.8.13.
**Describe the bug**
funannotate is raising a '_Permission denied_' error on _'filterGenemark.pl'_
filterGenemark.pl…
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+ Buat peta topik riset bidang yang akan ditekuni dan sebaiknya lebih dari tiga sehingga dapat dicari irisannya.
+ Gunakan fitur [Mindmap dari Mermaid](https://mermaid.js.org/syntax/mindmap.html) unt…
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https://gnps.ucsd.edu/ProteoSAFe/status.jsp?task=65694aaf25964885930fd3e4145b4fbb
thank you very much!