-
# Statement of problem
Datasets are being reorganized to support dynamic pipeline assignment--aka "soft assay type".
[Reference](https://docs.google.com/spreadsheets/d/1aCcGFoTWrBEb2ncN4XiV6rcT…
-
Hi,
I am having issues running infercnv and I have checked and do not not have missing data:
**ERROR:**
Error in smooth.spline(x, mean_p0_table$p0) :
missing or infinite values in inputs ar…
-
https://mp.weixin.qq.com/s/08GYoTNxgGX7MxKr2wfcDw
ixxmu updated
2 months ago
-
Hi,
I have run preprocess and germline calling steps for 9 scRNA-seq samples (10x genomics data).
Now, I hope to call somatic mutation, and I have a question about the cell barcode files.
H…
-
Hi, I'm looking for an algorithm to properly integrate 4 multiome objects I haves stored in seurat. At the moment both harmony and anchoring has failed to properly integrate but I would like to keep …
ahdee updated
3 months ago
-
### Background
Gene regulatory networks (GRNs), which delineate the interactions between transcription factors (TFs) and their target genes, represent the mechanisms governing cell differentiation an…
-
Hello,
I wanted to reproduce the vignette "Introduction to scRNA-seq integration" (https://satijalab.org/seurat/articles/integration_introduction)
and I ran into an issue when trying to load the…
-
**Operating system**
Which operating system and version are you using?
> Ubuntu 20.04.6
**Package name**
Which package / tool is causing the problem? Which version are you using, use `tool --ver…
-
Hello, everyone.
I'm conducting Seurat analysis for GSE-deposited scRNA seq data.
I performed integration of multiple data set (by "IntegrateData") and proceeded to gene expression profiling of ea…
-
Partial previous wrangling in #163
New ticket created for clean track down of wrangling with current template.
### Project short name:
EmbryonicHindlimb
### Primary Wrangler:
Arsenios
### Seco…