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Thanks in advance for your time. For some reason, my bigwig track only shows data for chromosome 1, and nothing else. I am on the right reference genome and have re downloaded the data to double che…
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```
What steps will reproduce the problem?
1. Load a sample bam and chr-sizes files from our ftp server
ftp://ftp2.cshl.edu/gingeraslab/tracks/BEDtools/ex1.bam
ftp://ftp2.cshl.edu/gingeraslab/tracks/…
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Automatic command line help is one of the nice features in BDS. I would like to
1) make bool help item show its type
2) sort help items in a specific order (I want to give each item an index) not b…
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I'm writing a tool to convert bam files to bedgraph/bigwig format using your library (See [here](https://github.com/benwbooth/bam2bedgraph)), but I'm running into segfaults. The code I'm writing is ch…
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```
What steps will reproduce the problem?
1. Load a sample bam and chr-sizes files from our ftp server
ftp://ftp2.cshl.edu/gingeraslab/tracks/BEDtools/ex1.bam
ftp://ftp2.cshl.edu/gingeraslab/tracks/…
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```
-Current version DaPars v0.9.0
-Description of error and relevant line number in the program
Using files converted to wiggles from bedgraphs or bigwigs, some of the
coverage may be in scientific…
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```
-Current version DaPars v0.9.0
-Description of error and relevant line number in the program
Using files converted to wiggles from bedgraphs or bigwigs, some of the
coverage may be in scientific…
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I have a big chip-seq.bedGraph file (7,617,673 rows) and a small windows.bed file (413 rows), both sorted, and based on reading the manual I thought that the fastest method would be
```
$ time inters…
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![image](https://cloud.githubusercontent.com/assets/9545816/7138528/81d80cfa-e2f3-11e4-8ad3-da62e085c33e.png)
1.because of positive and negetive number are exist at one site, i use two tracks to displ…
ghost updated
9 years ago
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**Original report ([archived issue](https://hoffmangroup.github.io/genomedata-bitbucket-backup/#!/hoffmanlab/genomedata/issues/11)) by Coby Viner (Bitbucket: [cviner2](https://bitbucket.org/%7B5c0277b…