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Dear Chris & Team,
I am designing a new paradigm and I would like test how HFG parameters account for differences in response outcomes across experimental conditions, as well as potentially look in…
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Hello, Hubert,
Thanks for developing this tool, since we have a lot samples, can we co-assemble all of them and then run this tool on the co-assembled contigs?
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Description
Sub-lineage of:DF.1(BA.5.10.1.1)
Earliest sequence:2022-10-19(United States)
Countries circulating:United States134, Germany9, Canada7, Switzerland1, France1, Japan1
Sequences:153
N…
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bio_embeddings raise Exception
```
bio_embeddings.utilities.exceptions.MD5ClashException: There is at least one MD5 hash clash.
This most likely indicates there are multiple identical sequences in …
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When uploading some 30 sequences to test usher (dev.usher.bio) I get the following error response after the usual minute:
```
This page isn’t working
genome-test.gi.ucsc.edu didn’t send any data.…
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Hello, I like singlem, thanks for developing it. I installed the conda version and ran in the following command:
singlem pipe -1 /tmp/Sample_1u_001.R1.fq.gz -2 /tmp/Sample_1u_001.R2.fq.gz -p fild…
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Hello, I have just pulled Mitoflex into an older Dell R900 server running Scientific Linux (= RHEL 7) and I am currently trying to test it using `test_config.py`. I keep getting the following message:…
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take the following program:
```
from Bio.Align import PairwiseAligner
aligner = PairwiseAligner()
alns = aligner.align("GATTACA", "GATCA")
out = format(alns[0])
print(out)
```
With Bio…
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Hi,
I am trying to run the workflow for datasets of cell lines obtained with the TSO500 panel on a Nextseq 550 device.
It gives an error for the varlociraptor call stating: `Error: samples.tumor.…
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I found difficulty to install the tutorial T010 because It seems the MDAnalysis package is not installed properly or numpy package is with an issue. Please, see the error message below:
```
ValueE…