-
Hi,
I generally parallelize dorado basecalling by generating a list of read_ids via `pod5 view`, and then split the read_ids and feed them iteratively to dorado via a batch script.
This has been …
-
Hi,
Thank you for this tool. Before I start, I want to make sure I understand the situation: you include a per-release version with bascalling models for R10.4.1 5khz but currently the way to use the…
-
# Issue Report
## Please describe the issue: My progress bar for running duplex is still at 0% for the last 12 hours.
*Please provide a clear and concise description of the issue you are s…
-
# Issue Report
## Please describe the issue:
Hi, I was wondering if it is possible to access the standalone dorado executable using just the minKNOW installation? ie without having to install do…
-
# Issue Report
My stand alone installation of dorado on a unix-based cluster did not come with the models. I downloaded the models manually; but dorado doesn't seem to see them. How can I configur…
-
Hello all,
We performed Nanopore sequencing on a non-model species of green algae to see the relationship between methylation status and local mutation rate.
Basecalling was done with Dorado v0…
-
I have an intel macbook pro 2020 but have failed to make the dorado build.
-
I can see from previous issues that duplex basecalling was once enabled, but when I tried running bonito duplex, it said 'duplex' was an invalid command.
Is it currently possible to run duplex baseca…
-
Hi,
I am just checking as some of the versions confuse me a little
Can the res_dna_r10.4.1_e8.2_400bps_sup@v4.3.0_4mC_5mC@v1 model be used to basecall data generated at 5khz?
The table suggests …
-
### Basic questions:
- [X] I am actually using ketting, and not any other software (e.g. magma)
- [X] I am using the latest Ketting version at the time of writing for the Minecraft version, that I…