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- [x] General idea of json libraries
(Important notice about possible remote requests to NCBI / other sequence data providers)
- [x] Describe new method for IMGT import (original `imgt.json.gz` will…
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Attempting to process partis output file in ` /fh/fast/matsen_e/dshaw/cft/data/seeds/QB850.001-Vh/`
```
process_partis.py --annotations /fh/fast/matsen_e/dshaw/cft/data/seeds/QB850.001-Vh/Hs-LN1…
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But the alignment file not renamed? The `pir` and `msf` files were also renamed.
Are sequences for the DPA2 pseudo gene forthcoming?
This isn't a technical issues just a consistency issue.
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The image preview doesn't work. When the cursor below img file, only text info showed
I guess I didn't get vifm configured properly, the script wasn't invoked at all, but I couldn't find where the pro…
blurm updated
8 years ago
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For current species present in IMGT.
Also, include additional checks for xmllint crash for unknown species.
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Hello,
I am trying to use Tracer on a Windows 7 machine within cygwin. I followed the instructions posted here and when trying to test the installtion I get the following error message:
> Traceback …
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**[Original report](https://bitbucket.org/kleinstein/changeo/issues/72) by Robert Amezquita (Bitbucket: [Robert A. Amezquita](https://bitbucket.org/Robert A. Amezquita), ).**
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http://jvi.asm.org/content/81/4/1619
sequencing classified as "sanger". Note: all sequences were supposedly obtained with an HLA-B*57:01 tetramer, but some of the individuals are actually HLA-B*57:03…
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```
fabio@ahmad-desktop:~$ mixcr importFromIMGT
Starting importFromIMGT.sh script
/home/fabio/.linuxbrew/Cellar/mixcr/1.8.1-1/mixcr
MiXCR v1.8.1 (built Wed Jun 29 10:35:12 CEST 2016; rev=d7c1254; bran…