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I am using the EvolTree to do dn/ds calcultions. I have a iphylip file of coding sequences and I am getting the following error:
"in translate
for nt2 in newcod[1]:
IndexError: list index out o…
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truncated-playback-and-restart__splice_main_splice_ad.html failed on all 8 TVs in the London plugfest.
* On 5 of 8 it timed out without running
* On the 3 of 8 where it ran, the following observatio…
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Are there some parameters I can adjust to improve my hifi trio binning assemblies? The hap1 assembly is too big (700m vs 530m), while the hap2 assembly is too small (370m vs 530m). Coverage is ~72X. B…
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I think this is a pretty big ask, but I'd like to be able to configure, e.g. in the game rules, a different point value for each intersection on the board. When the final score is evaluated, each inte…
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Migrated from https://redmine.open-bio.org/issues/3419
@hyphaltip wrote:
> The strand of the translated sequence (query or subject depending on the analysis) is lost for tfastxy and fastx/y reports.…
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Hello,
when performing a virulign analysis and exporting it as a global alignment the following error pops up (repeatedly for every element of the alignment). It confuses me somehow.
Warning: Ne…
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| Difficulty | Expected Duration | Possible Mentors |
|-|-|-|
| Medium | 175h | @reece |
### Summary
SeqRepo provides a simple interface to biological sequences and subsequences, with a single…
reece updated
1 month ago
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Dear Dr. Hajk-Georg Drost
Recently, I used one of your programs named "LTRpred".
I keep getting this error in the Join solo LTR Copy Number Estimation table after Finished LTR CNV estimation…
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I downloaded some courses but all of them only had 360p videos. Is there any option to increase the resolution of the videos?
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Hi All,
I am using this issue like a forum question:
Does anyone know of published research that deals with selecting the bounds for the sensitivity analysis, and especially how model evaluation…