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Hi, @bmill3r
Sorry to trouble you. I'm new to analyzing spatial transcriptomes. I am trying to do it with your tools to deconvolve. I have two questions.First, I see the tutorial in “https://github…
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The error with last lines from trace back:
```
...
File "/home/user/REPO/dbimport.py", line 306, in _importGBFile
count = db.load(record)
File "/usr/lib/python3/dist-packages/BioSQL/BioSeqD…
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Hello, Thank you for developing a great tool.
I have run DRUMMER with my data and obtained several output folders. I used the same command line for DRUMMERS for both sample 1 and sample 2.
However…
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currently, in the sc_demultiplex step, the program will keep all the reads in memory and then open CSV and write to them one by one (because we cant open too many files at the same time). it will beco…
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Can you help me figure out why I'm not able to get any table from Shiny app.
The message showing is: " DataTables warning: table id=DataTables_Table_1 - Requested unknown parameter '4' for row 125…
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My Dataset is Like this...
**SNP**
![image](https://user-images.githubusercontent.com/37298751/94503365-3d545980-0241-11eb-9a7b-0411ac7b1b8e.png)
**Gene Expression**
![image](https://user-im…
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Hi there,
I'm analyzing a custom human transcriptome and so far all analyses are working except for DPA. For reference, my design is a timecourse with triplicates for 4 timepoints, here's the prin…
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In the future, I want to map the resequencing data of different species of onto my map genome.Then the group vcf with good classification is used to carry out the process of vgmpmap
I wonder if this …
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Version: `kallisto 0.51.1`
I'm following a workflow outlined in [issue 456](https://github.com/pachterlab/kallisto/issues/456) for using lr-kallisto with bulk ONT. `kallisto bus`, `bustools sort`, …
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First of all, thank for scrublet! I have been using for a while now, and much prefer it over the alternatives.
As for the issue, it's a bit niche but can potentially cause serious silent issues on …