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We should review the lethal phenotype patterns and add them to uPheno if we believe the way they are are the way to go!
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- [x] Extend API
- [x] Write python script to pull JSON file of BRainName neuropils and their relationship to each other.
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Can we allow for ‘anatomical entity’ to be a top-level defined class (i.e., at root), but it is defined (i.e., equivalence axioms) in terms of other COB classes, such as material anatomical entity an…
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We have discrepancies in the way perflabel is generated when multiple rdfs:label entries are present such that in the staging environment one label is chosen and in production, a different label is ch…
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[abnormalTopology.yaml](https://github.com/obophenotype/upheno/blob/master/src/patterns/abnormalTopology.yaml)
This is a great pattern! I can definitely use this one!! I didn't realized the point …
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[protrudingMorphologyInLocation.yaml](https://github.com/obophenotype/upheno/blob/master/src/patterns/protrudingMorphologyInLocation.yaml)
There are more spaces than normal in the equivalentTo vari…
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Thank you for the SSSOM initiative!
I think I know the answer, but I would like to get your opinion on this topic: Is there a way to express in SSSOM the fact that one or both of subject/object ar…
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Initially this is being done via a UI query and UI download but near term can be converted to GeneWeaver API calls:
https://geneweaver.org/help/#api
**Name of the dataset**
GeneWeaver SARS ex…
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Hi all,
I've recently been having a discussion regarding uPheno with @matentzn, who requested I write this up as a uPheno issue here.
We've put a lot of work into creating gold-standard (manual)…
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The [DANS KOSo Observatory](https://knoworg.org/the-dans-koso-observatory/) contains more detailed information about KOS, in particular information about KOS versions. The dataset already contains BAR…