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SPAC25A8.01c/fft3 has this two values in the column_17 qualifier, and a with qualifier:
```
FT /GO="aspect=F; term=protein binding; GOid=GO:0005515;
FT evidenc…
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Hi,
Thanks for your great work. I wonder why you choose the widow as 50kb but not 100kb or 500kb. Does the window size influence the results?
Thanks!
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Hi,
First, thanks for signac. Great package for scATAC analysis.
What I am attempting is the reverse of what is in the documentation. Instead of finding overrepresented motifs/TF in features, I …
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@TobiasKletter we should also add the example images for download to the README!
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Hello,
I am a researcher working in William Noble's lab at the UW on a package called PASTIS (https://github.com/hiclib/pastis), which infers 3d chromatin structures from Hi-C matrices. I am curren…
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Hey,
I am trying to create a Chromatin Assay, but I receive the following error:
`ATAC_Seu
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Hi,
Thanks for the detailed documents. I was wondering if the outlier_count column means the number of cells with certain chromatin loops.
Best,
Jiankun
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https://mp.weixin.qq.com/s/UXVdCQQnEhWCd6X7mr2NoQ
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I encountered this error when I was running mvi.train():
```
mvi.train()
ValueError: Expected parameter loc (Tensor of shape (128, 11)) of distribution Normal(loc: torch.Size([128, 11]), scale: tor…