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I'm trying to build dorado 0.3.4 from source using GCC 11.3.0 + CUDA 11.7.0, and I'm hitting the following compilation error:
```
/tmp/easybuild_build/dorado/0.3.4/foss-2022a-CUDA-11.7.0/dorado/do…
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Hi @tijyojwad,
I am using SQK-RBK114.24 kit with Dorado basecaller for plasmid sequencing. Some of my plasmids have polyA tail in the plasmids varying from 80 to 120 bp. The Dorado basecalles is no…
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Hello, do you have training data for R10.4, 4 and 5kHz? Or is that available via dorado? Or not at all?
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# Description
## Payout
General Prizes: Finalist 1-5 will receive an equal payout of the total winnings.
🏆 Finalist # 1: The Screaming Eagle Prize = 2000 ANT
🏆 Finalist # 2: The Almighty…
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# Issue Report
## Please describe the issue:
I am running dorado for base calling and alignment. The base calling can run successfully, but when doing alignment, it always raise errors.
## R…
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Hello!
I wasn't sure where to post this, so feel free to move it if it's in the wrong place! Hello!
I'm trying to simulate barcoded reads with readfish and Icarust and running into an issue. W…
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As we plan to have a large amount of sequencing runs requiring Modified basecalling on our promethion (2xGV100 GPU ) in the next months, we are testing a cluster where 4 x A100 80GB are available (2 x…
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Hi, could you please add `-b/--batchsize` to `dorado_basecall_server`? It runs out of vRAM for us.
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Dear author:
i got the following error message when calling bamstats
"Read '09d5a7df-59e1-4689-9704-4fb9eb5c64e1' appears to contain implausible alignment information."
I am a little confused abou…
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Hi, devlopers of Dorado, I notice the default alignment preset of `Minimap2` in `Dorado` is set to `lr:hq` in `Minimap2Options.h`.
Specifically, in line93
```
static const std::string DEFAULT_MM_PR…