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figure out why this no longer has histone aceylation:
http://www.pombase.org/spombe/result/SPAC17G8.13c
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Hello,
I'm not sure at what stage STAR-fusion fails - but it seems to have generated the star-fusion.fusion_predictions.abridged.coding_effect.tsv but might be missing some of the output files fro…
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### Description of the bug
After updating nextflow to the most recent version 23.10.1.5891 (Jan 12th, 2024) I cannot execute anymore diffabundance workflow v1.4.0 which I could execute before. The …
aghr updated
6 months ago
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Contains CC annotations only
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Hi Braker Team,
I am running BRAKER3 for annotating new Cannabis Haplotyes, but I am having a really low busco ~3% and only between 11,000 to 14,000 genes predicted where the expected is around 40,…
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There is a lot of redundancy with existing annotation in the inferred GAF
Here are some examples:
1.
thi1. 2 redundant annotations:
ii) redundant and identical (we made this annotation …
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We would like to use Pharmacogenetics to inform target prioritisation and visualise the data onto out target prioritisation page (full scoping on the right attribute still needs to be covered).
In …
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Hi! I'm currently facing an issue while running Decoil: after going through various samples, I've encountered a persistent problem with one specific sample. The process seems to be stuck at a particul…
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Hey,
I am getting a biotype related error:
`Runtime error:
Traceback (most recent call last):
File "/ebio/abt6_projects9/abt6_software/bin/Comparative-Annotation-Toolkit/env/local/lib/python…
fbemm updated
4 months ago
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The downloading of new versions of pombase-gafcheck-prediction.gaf is currently disabled because sometimes the GO pipeline fails and the file is missing from the pipeline artefacts. We should re-enab…