madagiurgiu25 decoil-pre issues - Githubissues

madagiurgiu25 / decoil-pre

Reconstruct ecDNA from long-read data using Decoil tool

BSD 3-Clause "New" or "Revised" License

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issues

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T2T Reference Genome

#15 thomasjay3 opened 2 weeks ago
1
adjusting decoil reconstruct parameters

#14 eesiribloom opened 3 weeks ago
1
Genes contained within ecDNA

#13 eesiribloom opened 2 months ago
0
Conda package for decoil

#12 madagiurgiu25 opened 3 months ago
0
ecDNA Filtering

#11 thomasjay3 closed 2 months ago
5
2 use singularity to run decoil

#10 madagiurgiu25 closed 3 months ago
0
Hope a command only for Decoil Reconstruction

#9 zhober closed 3 months ago
2
No summary.txt file produced

#8 eesiribloom closed 3 months ago
8
visualising the output of decoil

#7 eesiribloom closed 3 months ago
3
parameters

#6 eesiribloom closed 5 months ago
3
Stuck at "Combine simple circles" step while running Decoil

#5 zhober closed 3 months ago
14
Use conda to install Decoil

#4 madagiurgiu25 closed 3 months ago
8
Use pip to install Decoil

#3 madagiurgiu25 opened 7 months ago
0
Use singularity to run Decoil

#2 madagiurgiu25 closed 3 months ago
3
An IsADirectoryError when generate summary.txt in the final step.

#1 Uigi1600 closed 7 months ago
6