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This is an experimentHub data package. Also pinging author @iciarfernandez
Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repos…
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### Contact Details
ks164@duke.edu
### Scripts
03a-methylation_variables.sh
### What happened?
script runs successfully until calculating DunedinPACE:
Predicting, adjusting and standardizing D…
ks164 updated
2 months ago
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@hsun3163 how the model looks like, and what approximation has been made.
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I helped a colleague debug an issue with nanopolish call-methylation, whereby a BAM file with no spliced alignments would be detected as having a spliced alignments, leading to the program stopping. T…
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Hi, everybody!
It seems that the subcommand "view" of the command "pod5" does not work for all kind of Nanopore data. See, for example, the following case:
curl -OL 'https://sra-pub-src-1.s3.ama…
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Hi, I am using modbamtools to view methylation of a region of interest and ran the following command:
```
modbamtools plot \
-r :- \
-b .bed \
-o \
.bam
```
And received t…
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#### Describe the bug
`statsmodels.discrete.discrete_model.MultinomialResultsWrapper.score_test` crashes due to the following function call in this traceback:
```
Traceback (most recent call last…
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Thank you for developing this tool, I had been looking forward to using it!
For a metagenomic sample I'm analyzing, I have a strong suspicion that a certain plasmid should be binned with a certain …
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Tabular data are treated very differently than data for NLP, audio, vision, etc. and therefore the worflow for tabular data in `datasets` is not ideal.
For example for tabular data, it is common to…