-
Update the following URL to point to the GitHub repository of
the package you wish to submit to _Bioconductor_
- Repository: https://github.com/lisiarend/PRONE
Confirm the following by editing …
-
Run the existing pipeline, node-style.
https://github.com/aws-samples/aws-healthomics-eventbridge-integration
```
cdk bootstrap aws:/// # do this if your account hasn't been bootstraped
cdk …
-
Enhanced, improved and novel NMDC workflows to advance microbiome science
Similar to the entire field of genomics, all NMDC workflows (Appendix 15) are subject to an iterative
improvement process. To …
-
When we say that some `Biosample` has `total_strontium` `{'has_numerical_value': 15, 'has_unit': 'ppm'}` , we are saying that the domain includes, at a minimum, the `Biosample` class. Possibly it incl…
-
**Description**
`cleanyerreads` workflow fails in bactopia 3.0.1. This works (with exactly the same data and bactopia flags) in version 3.0.0.
**Steps to Reproduce**
Steps to reproduce the behavi…
-
Hi Michalk8, I am very excited to use Squidpy/Tangram to deconvolute public Visium 10X datasets. I tried to run the tutorial that is explained in the vignette (https://squidpy.readthedocs.io/en/stab…
-
Description of the Problem:
When running `extract-records` against legacy study datasets, we are finding missing DataObjects as defined by:
- DataObject.id present in one or more has_input/has_outpu…
-
**Primary: Pat**
We want to separate PredictMod from GFKB and list it under Tools.
First Steps:
- [x] **Pat** to ask Jonathon about the resources page being under stock HIVE Lab webpage or in the Pr…
-
NEON has metadata about if a sequencing run passed or failed based on how many reads were generated. We should incorporate checking this field and not make an omics record if the value is failed.
NE…
aclum updated
8 months ago
-
`compute_pricing.py` fails with the following error if run name is empty.
```
python compute_pricing.py 9427547
Traceback (most recent call last):
File "/Users/sachen/Desktop/amazon-omics-tutori…