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MolSysMT has to give a name to proteins, small molecules, and entities. These names can be extracted from an mmtf file, but what happens with other forms? We probably need to implement in Sabueso the …
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Create a User that *has one* set of goals.
- CreateGoal() -> instantiates an empty goal
- updateXXX() -> be able to update each individual goal
- GetXXXGoal() -> be able to retrieve goal number fo…
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Hello.
After inspecting the formatting of RFAA's structure prediction PDB files for (multi-ligand) protein-ligand complexes, it seems that the formatting for ligand (HETATM) atoms associated with e…
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Hi Peter
Looks like these Reactome pathway xrefs are missing:
gluconeogenesis (GO:0006094) = R-HSA-70263
fructose biosynthetic process (GO:0046370) = R-HSA-5652227
galactose catabolic process vi…
sjm41 updated
2 weeks ago
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GAF model 57ea2dae00000004
MGI MGI:1916888 Enho Mmus GO:0051055 PMID:22318315 IMP MGI:MGI:5781010 P gene taxon:10090 20160927 GO_Noctua
MGI MGI:1916888 Enho Mmus GO:…
ukemi updated
3 years ago
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Elpy Error
The backend encountered an unexpected error. This indicates a bug in
Elpy. Please open a bug report with the data below in the Elpy bug
tracker:
https://github.com/jorgenschaefer/elpy/iss…
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Hi everyone,
This might be a silly question but I am wondering if I should use masked or unmasked genome assembly as input to EVM
Hope someone can clarify me this point
Thanks in advance
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Meeting follows on from May 2021 meeting at #43.
**When**: Tue June 8th 2pm London (BST).
**Where**: https://ucl.zoom.us/j/99344325484
**Recording**: https://youtu.be/q64K7qyGNs8
**Actions from …
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A bit of a recap from what I mentioned in the January meeting #67
I found these crystal structures from the [Protein Data Bank](https://www.rcsb.org). These provide more evidence that Fenarimol an…