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Hi, thanks for the great repo. I'm interested in generating sequences with bmDCA for protein families that have around ~20k samples with ~400-600 total aligned positions (and no position with more tha…
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urn:cts:greekLit:tlg5026.msA.hmt:18.120@Ψ[1]
The Ψ is wrapped in a title element with a ref element as well for the 23rd book of the Iliad. MOM should skip over these single letters when they are wr…
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Type: Bug
I log in with my MSA to sync settings which VSCode logs in as @outlook.com. I installed the C# Dev kit and enabled the Trusted Extension but somehow it uses my @gmail.com (which is linke…
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Hello,
I was wondering if there was an alignment file for the orthologues hidden within the results folder.
Also, is there a way to add the species name to each header of the orthologues fast…
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Liste des travaux prévus :
Revalorisations pour :
Les prestations Famille au 01/04/21 : AAH, RSA et RSO, PPA, AF, CF, PAJE, ASF
La prestation Retraite au 01/01/21 : ASPA
Mise à jour de zonag…
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Hi,
I am trying to run AF-multimer and my script ran for about 3ish hours and I get the following error. Not sure how to resolve this and would appreciate any advice.
`singularity exec --nv -B…
apal6 updated
6 months ago
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In order to allow lossless compression, insertions need to be included in the Maple format.
I could find this edge case specified in the preprint.
It's easy to do, one just needs to agree to a conve…
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Hi,
The process is automatically killed when I predicted a complex with 3000 or longer aa. But there was no problem when I use alphafold2-multimer. Could you please give me some suggestions for re…
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Thank you @sokrypton , I could run the msa and get results.
While executing Alphfold step, I got the error below,
NameError Traceback (most recent call last)
[](…
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Hi
I've used your code to mask recombination regions in MSA, and it works really well (thank you!). However, I am currently working with a gene alignment which is in xmfa format. CFML has given me th…