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Hello.
I encountered the error below, and I think all the cd.aux are not found! And Error: Unknown argument: "max_smp_vol" :
Error: Unknown argument: "max_smp_vol" …
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Hello, I want to train a new model on your scpdb subset. Can you give me the structure id in each fold, so I can optimize my model? Thanks.
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Hello, author. Is there any difference between this annotation process and geta? （https://github.com/chenlianfu/geta）Have you made a comparison?
Do you suggest that I continue to run EVM to integrate…
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Dear authors,
In the data folders, I could find HMM profiles for nrps_pks domains or core biosynthesis genes.
Is there any way to get MSA files to generate these profiles?
Thanks,
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**Are you using the latest release?**
yes
```
funannotate -version
funannotate v1.8.15
```
**Describe the bug**
When running funannotate annotate with external phobius, signalp, eggnog-emapp…
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Hi @fpusan
Based on the discussion in the thread #640, I have some conceptual queries.
As @mkariush pointed that "_(by looking at the 12.funcover.pl script) that the total length is normalised t…
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```python
>>> import pyobo.sources.pfam as pfam
>>> obo=pfam.get_obo()
>>> obo.write_obo("pfam.obo")
INFO: [2023-01-11 13:02:11] pystow.utils - downloading with urllib from ftp://ftp.ebi.ac.uk/pub…
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Hi,
My program just stops at step 4, without any errors, the terminal freezes and 2 days later program crashes. I have updated to the latest version of SqueezeMeta. test_install.pl works fine! Also u…
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I am trying to do the simplest possible test run for interproscan-5.57-90.0, which I have installed on Linux through standard means. The test run command is:
`$HOME/InterPro/interproscan-5.57-90.0…
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Hello,
I am using the METABOLIC but confused with the threshold of Hmmsearch. The TC and NC scores are not found in the hmm file in the current METABOLIC_hmm_db.tgz like amoA.hmm and PF02406.hmm. I w…