-
our ontology browsing up and down the subclass hierarchy is not very intuitive. I had an idea that maybe there was a way to reuse some functionality from AmiGO for this purpose?
or if nothing else, p…
-
Originally reported on Google Code with ID 124
```
Hi,
can this file be removed?
https://phenotype-ontologies.googlecode.com/svn/trunk/src/ontology/vertebrate-curated.owl
It is basically empty.
S…
-
```
[Term]
id: HP:0004323
name: Abnormality of body weight
namespace: human_phenotype
alt_id: HP:0010718
synonym: "Abnormality of habitus" EXACT []
is_a: HP:0001507 ! Growth abnormality
```
I think …
-
need to import the kegg pathways and gene members.
kegg maps its pathways to a uber-gene (kegg ortholog), to which we can link to a species-specific gene via their orthology maps.
here is the relevan…
-
the ZP pages were turned off because there were issues with this ontology. these need to be reinstated once we've solved the issues in jira:
https://support.crbs.ucsd.edu/browse/LAMHDI-353 and
http…
-
tooltip text pulled up from the files in js/res might not work correctly if run locally, as the aax call will not work with the "file" url. Workaround needed.
-
Originally reported on Google Code with ID 13
```
On the website https://code.google.com/p/phenotype-ontologies/wiki/HP
Under "Editing the axioms" there is a link to the current edit-file: http://p…
-
Dear Guangchuang.
I have come across two issues, maybe you can clarify.
I perform a GSEA analysis within clusterProfiler using
`res.GSEA.GO ID Description setSize enrichmentScore pvalue p.adjus…
-
revise abdominal nodes based on RADLEX (see attached) and also compare to other anatomy ontologies
Reported by: cindyJax
Original Ticket: [obo/mammalian-phenotype-requests/829](https://sourceforge.n…
-
Originally reported on Google Code with ID 20
```
See attached
```
Reported by `cmungall` on 2014-05-07 06:18:55
- _Attachment: Screen Shot 2014-05-06 at 11.14.49 PM.png![Screen Shot 2014-05-06 at…