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Defining mutations:
EG.1.3>G1914A (ORF1a:R550H = NSP2_R370H), T6394A (ORF1a:D2043E = NSP3_D1225E), G15372A, C18508T (ORF1b:L1681F = NSP14_L157F), C22227T (S:A222V), C22264T, G22319T (S:D253Y) (edited…
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**Defining Mutations:** `BA.4.6` > `T23449C` > `A13809C` > `G625T(ORF1a:K120N)` > `G521T(ORF1a:V86F), ins688_CAT(ORF1a:ins_141H), G22927T(S:L455F)`
**Query:** `G521T, G22927T,A13809C`
**Earliest seq…
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Mutations on top of XBB.1.16.12: T5619C, C14117T
Inquiry: Spike_L368I,E180V,Q52H +T5619C
Sequence: EPI_ISL_17775025, EPI_ISL_17783018, EPI_ISL_17799024,
EPI_ISL_17799052, EPI_ISL_17799498, EPI_ISL_…
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Transferred from https://github.com/sars-cov-2-variants/lineage-proposals/issues/126
FR.1+C25572T+C337T+C882T(orf1a:A206V)+C14097T,C15017T(orf1b:A517V)+T28019C,C14599T,C25603T+G28374A(orf9b:G31R, N…
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FL.2 +Orf8:S67F(C28093T)+C11620T+S:G181A( G22104C)
GISAID query:G22104C,C11620T,C28093T
No. of seqs: 17(Singapore 1 China(Hubei, Sichuan,Henan,Shanghai) 16)
First seq: EPI_ISL_17495415 Shanghai…
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Transferred from https://github.com/sars-cov-2-variants/lineage-proposals/issues/460
After XBB.1.16.6 and XBB.1.16.9 this is the third sublineage of XBB.1.16 to acquire S:F456L and spreading.
Th…
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FL.4+A28615G,G23858T(S:A766S)
GISAID query:A28615G,G23858T
No. of seqs: 44(Brunei 1 Canada 2 Japan 14 Malaysia 1 Myanmar 8 USA 4(1 from Saudi Arabia 1 from France), Thailand 1 Vietnam 1 China 2 Si…
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Original proposal for what designated as FT.3 and FT.3.1 now:
_now this seems to be a 3-step, 1st S:Q52H, 2nd S:T478R and S:D1168H, 3rd S:A348S_
**Defining Mutations:** [_on top of XBB.1.5.39's…
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### **Description**
**Sub-lineage of:** XBB.1.5
**Earliest sequence:** 2023-4-21, Puerto Rico, EPI_ISL_17700246
**Most recent sequence:** 2023-6-27, USA, Florida, EPI_ISL_17979245
**Countries circ…
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### **Description**
**Sub-lineage of:** BA.5.2.46
**Earliest sequence:** 2023-3-3 — EPI_ISL_17187405
**Most recent sequence:** 2023-5-11 — EPI_ISL_17765632
**Countries circulating:** Australia (7)…