-
Hi escape team,
Thank you for developing this wonderful package.
I am trying to understand the best practices for GSEA workflow, and I have a question regarding normalization.
I have an integrate…
-
Hi, all
When I use monocle3 default parameters to `plot_cell_trajectory` , I got a not fully connected graph, as below:
 and P1, mouse, scRNA-seq, cochlear epithelium (Kelley)), when I loaded the Primary analysis and then cli…
-
**User story**
As a user of the scRNA Core Cell Extraction pipeline, I would like the bed verification for the LRC PBMC Bank plate to the LRC Bank Seq and LRC Bank Spare tubes to support the scenario…
-
Hello, Flowsig is an excellent tool for studying intercellular communication.
However, I encountered some errors while using it.
It seems not to support recognizing all ligand-receptor libraries of …
-
Hi Bokai and Shuxiao,
I would first like to thank you for developing this interesting method and making it open-sourced. I found the protein annotation and spatial pattern discovery section particu…
-
It looks like `matrixStats` updated the signature of `rowQuantiles()` and `colQuantiles()` to include a new `digits` argument last year ([commit 5e9be8](https://github.com/HenrikBengtsson/matrixStats/…
-
### Problem/New Plotter
Main canvases can be arranged into rows or columns for rendering, but is it possible to arrange them in a grid?
If we have the following:
```
data1 = np.random.randn(5, 5…
-
hi,
I am trying to find the way to download this 'sciCNV' package and use to analysis my single cell data, and I coudnt find a link or source to download it , can you direct me where I can download …
-
Hello,
I would like to know what the minimum requirement in sample size is for bulk RNAseq in order to trust the inferred cell fraction. Do we need at least 10, 20 samples ?
Thanks !