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Trying to build python-dmidecode with GCC 14 fails with:
```
[ 18s] src/dmidecodemodule.c: In function ‘__dmidecode_xml_getsection’:
[ 18s] src/dmidecodemodule.c:482:90: error: passing argume…
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Hello,
I would like to use BLCA for taxonomic classification of 18S rRNA data. Would you recommend to use higher confidence score thresholds for lower taxonomical levels (family, genus, species)?
…
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It started to fail in openSUSE Tumbleweed about two weeks ago, maybe an issue with a dependency that changed its output?
https://build.opensuse.org/package/live_build_log/devel:languages:perl/perl-…
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I am working on a project that involves surveying public 18S SSU rRNA gene datasets for specific taxonomic groups and would like to incorporate EMP data if i can. However, I understand that release 1 …
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- title: 18S Metabarcoding Genetic Observations of Marine Species in the Port of Wallhamn,
Sweden (2022)
- GBIF: https://www.gbif.org/dataset/456b2a82-cc89-4b68-9656-f67252d11b0a
- created: '2023-…
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- title: '18S: A comprehensive dataset on spatiotemporal variation of microbial plankton
communities in the Baltic Sea'
- GBIF: https://www.gbif.org/dataset/6bce37d6-a682-4cca-89c4-7464cefa65e9
- …
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- title: '18S data from: Diversity of Pico- to Mesoplankton along the 2000 km Salinity
Gradient of the Baltic Sea (Hu et al. 2016)'
- GBIF: https://www.gbif.org/dataset/350cbc96-5d4b-499b-bd28-136…
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Hi all,
I need to have the reference sequences from the OTU table. The OTU table has 96,764 OTUs. So I need to have 96,764 reference sequences.
Also, I am wondering if chimera check was processed in…
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Is the sequencing depth for the taxonomy dataset similar across sites? Has anyone normalized the 16S/18S data? thanks - Kelly
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Hello there
Thanks a lot already for the work on this package!
I am trying to cluster 34,937,058 sequences of about 1000bp (18S amplicons) contained in a single fasta file, I'm using the following…